| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is bcp [H]
Identifier: 33863889
GI number: 33863889
Start: 1723972
End: 1724439
Strand: Direct
Name: bcp [H]
Synonym: PMT1622
Alternate gene names: 33863889
Gene position: 1723972-1724439 (Clockwise)
Preceding gene: 33863885
Following gene: 33863892
Centisome position: 71.51
GC content: 50.0
Gene sequence:
>468_bases ATGACCCTGAAGATTGGTGATCCAGCACCTGATTTCAATCTCCCCAATCAGGACGGCACCCTCGTTCAGCTGGCATCACT AAGAGGTCAACGAGTTGTGATCTACTTCTATCCGAAGGACGACACCCCTGGGTGCACGAAGGAAGCCTGCAATTTCCGCG ACCAATGGGAACGCTTCGAGGCCAATGACATCAAGGTGCTTGGTATCAGCAAAGACGGTGCTACATCCCACACCAAATTC ATCAAAAAGTATCAGATTCCTTTCACCCTTCTTAGCGACGCGGAACCCTGCCCAGTGGCCAGCTCCTACGAAAGCTATGG GCTCAAAAAATTTATGGGACGCGAATACATGGGCATGATGCGCCATAGCTTTGTCGTAGATCCAAAGGGCAATCTGGAAC TGATTTATCTAAAGGTGAAAGCCGCAACGATGGCCGATCAAATCCTCAAAGACTTGGGGCTCGACTAA
Upstream 100 bases:
>100_bases GCCCATTGCTCCTCCTCCGGACTGATAGGCATCAAAGGGGCCTGCATCGGAAATAACCACAACGCCAGTACGCTTCGGCT ATTGAGTGGAAGCGGCATCA
Downstream 100 bases:
>100_bases TCCGATCGTGCACGTCAACCATCCCCTCCAAGACAAGATTCGGATGATGCACCACATCAAGACCCCTCTGACTGAGTGCT TCCTGAAGAACCGAGGCATC
Product: bacterioferritin comigratory (BCP) protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTLKIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFEANDIKVLGISKDGATSHTKF IKKYQIPFTLLSDAEPCPVASSYESYGLKKFMGREYMGMMRHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD
Sequences:
>Translated_155_residues MTLKIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFEANDIKVLGISKDGATSHTKF IKKYQIPFTLLSDAEPCPVASSYESYGLKKFMGREYMGMMRHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD >Mature_154_residues TLKIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFEANDIKVLGISKDGATSHTKFI KKYQIPFTLLSDAEPCPVASSYESYGLKKFMGREYMGMMRHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=147, Percent_Identity=43.5374149659864, Blast_Score=125, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6322180, Length=116, Percent_Identity=38.7931034482759, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17479; Mature: 17348
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFE CEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHHCCCHHHHHHCC ANDIKVLGISKDGATSHTKFIKKYQIPFTLLSDAEPCPVASSYESYGLKKFMGREYMGMM CCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHHH RHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD HHHEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCC >Mature Secondary Structure TLKIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFE EEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHHCCCHHHHHHCC ANDIKVLGISKDGATSHTKFIKKYQIPFTLLSDAEPCPVASSYESYGLKKFMGREYMGMM CCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHHH RHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD HHHEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]