| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863858
Identifier: 33863858
GI number: 33863858
Start: 1692026
End: 1693006
Strand: Direct
Name: 33863858
Synonym: PMT1591
Alternate gene names: NA
Gene position: 1692026-1693006 (Clockwise)
Preceding gene: 33863857
Following gene: 33863859
Centisome position: 70.18
GC content: 56.57
Gene sequence:
>981_bases GTGGTCAATGCCAGTCTTAACTGGGGCAGCATTGTTGGAATCGTGCTTGCAGTAGGCGGTGCTCTGCTGTATTTCATGCG ATCGTTCAAGCCTGCCTTAGCACGCGACTACGACGTCTTTTTCGCAGCCATCGGCCTCCTTTGTGGAGGAGTTTTCTTTT TTCAGGGGTGGCGCCTGGATCCGATCCTGCAGTTCGGCGTGTTCCTGCTAGCCGGAACCACAATGTTTTTCGCCTACGAA AGTGTCAGGTTGAGAGGCGTAGCTGTTGAGGGGGCTCGGCGTTCATCCTATTTCGATGATGCACCAGCCCCGCCTATCAA CCAGGGTCGAGGCGGTGGCCTAAGGGGTGACTGGGATGAACCCTACGACCGCTTTGAGGAACCCCAACCGGTTCGACGAC GCTTCTCCAGTCGAGACAACGACGATGCTGATCGCCCTCAAGAAGACTTATACCGGCCTCGCAGAACCACAAGAGCTGCA ATACCAGAACAAGCAGCAAGCCGTCGCCGCAACAAGGAGGAAGAGTCCTGGGGCGAAGACTCAGAACGCTCTCGTCGCAT GGCCCGATTCGGCCGCCAGGATGATGAACAAAACAATCGTCCTGACTTTGGAGAACGCCGCAATATTCGCCAAGATCAGC GCCGGGGCAGCCGTCCCTCAGCCAATCAACAAACCACCAATCGAACCCAATTAAGCAACGAGCCAAGGTCTACGACGAGA GGGGGCTACGGCTCATCAAGAAAACCTGGTGTACCTCAGGGGTCTCAGATTCGTCCCGAGGCTGAAGATGCGGCCTACTC TCCTGCAAAGTCCAGGTCGACGGGATCCAGGCCCACAGCATCAAAGCCCTCCCGACCACAAGGCAATCCCTCAGCCACCA GAACAGAAGCGGCGCCTCCTTCATCATCAATGCCTGAGCCAAGACGCTCAGCTCCGCGAAGTTCAAGACCTCGCGACAAC AGTTCCCGTTTTGACGACTGA
Upstream 100 bases:
>100_bases GTTGACCGAAACCTCAAAGCAGCCTTGGCGCACTTCGTAGACTGAGCCCAACGAGGTTGGTTTTCAACCTCCTGTTCAGG CGTTTTCAGGGGGCGCAATT
Downstream 100 bases:
>100_bases AGCCCATTGCCAACAACCTGCAGCAACTGATCCTGCTTTTGGGGTGCCTGAGCCTTGGGAGCTGCATCAATTCGATTGAG AGAGCACCAGGTGGCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLDPILQFGVFLLAGTTMFFAYE SVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDEPYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAA IPEQAASRRRNKEEESWGEDSERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPPSSSMPEPRRSAPRSSRPRDN SSRFDD
Sequences:
>Translated_326_residues MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLDPILQFGVFLLAGTTMFFAYE SVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDEPYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAA IPEQAASRRRNKEEESWGEDSERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPPSSSMPEPRRSAPRSSRPRDN SSRFDD >Mature_326_residues MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLDPILQFGVFLLAGTTMFFAYE SVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDEPYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAA IPEQAASRRRNKEEESWGEDSERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPPSSSMPEPRRSAPRSSRPRDN SSRFDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf66 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010004 [H]
Pfam domain/function: PF07444 Ycf66_N [H]
EC number: NA
Molecular weight: Translated: 36588; Mature: 36588
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PILQFGVFLLAGTTMFFAYESVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDE HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC PYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAAIPEQAASRRRNKEEESWGED HHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCH SERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR HHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPP CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSSMPEPRRSAPRSSRPRDNSSRFDD CCCCCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PILQFGVFLLAGTTMFFAYESVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDE HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC PYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAAIPEQAASRRRNKEEESWGED HHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCH SERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR HHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPP CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSSMPEPRRSAPRSSRPRDNSSRFDD CCCCCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]