| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863854
Identifier: 33863854
GI number: 33863854
Start: 1688507
End: 1689808
Strand: Reverse
Name: 33863854
Synonym: PMT1587
Alternate gene names: NA
Gene position: 1689808-1688507 (Counterclockwise)
Preceding gene: 33863856
Following gene: 33863853
Centisome position: 70.09
GC content: 56.99
Gene sequence:
>1302_bases TTGACCTCACTCCCTCCAGCTGTCATTCCGGACACTTCGCTGGCGGTTGTTCTGGTTTCCAATGGCCCAGGGGAACTAGC GACTTGGGTTAGGCCCATTGCTGAGAGCTTGCATCGCAGCATTTTGATGCGTCCTCGCGCTGCAAGCTCGCCTATTGACT TGAGGCTGGTGTTGGTGCCTTGCCCGAATGCCACAGGACAGGAGGCTGATGCGGCTAGACGATGGATTCAGTTTGAGCAG ATCACACCAGCAAATCAGTTTTGGAATTTGTTGTTCTTTCCCCGACGCTATGGGCCGTGGCCTCGCCAAGGAGTGGTCGT TTTCCTTGGTGGAGATCAGTTCTGGAGCGTGCTTCTTTCAGGCCGCTTGGGCTACCGCCATCTCACCTACGCCGAGTGGG TGGCCCGCTGGCCTCGTTGGAATGACTGCATTGCTGCGATGTCTCCCAAAGTGCGGGATCAGCTGCCACGTCGTTTCCGG GACCGTTGCACTGTGGTGGGAGACCTGATGGCGGATTTGTCTAGTCTTGCAAGAGCTGAAGCCCCGCTGCCACAAGGCGA CTGGGTGGCTTTATTGCCTGGGTCTAAACGGGCCAAGCTCTGCGTGGGGGTTCCTTTCCTTTTGGAGGCGGCTGATCAAT TGGCTCGGCTGCGACCTGGATGTCGGTTTTTGCTTCCTGTTGCACCTACCACAAGCGTGAAGGAGTTGGAAAGCTTTATG AGTTCGAGCAATCCGATTGCTGCTGCCTATCGCTCAGCTATTGCCATGGTCAGGCCAGCTGAGCTTGATCAGCCTTGGCG AAGATTGATCACCAGGGCCGGCACGGTCATCTATCTCCAAGAGGATCATCCTGCGCATGGTCCCTTGAGCCAATGTGATT TAGCTCTTACCACTGTGGGGGCCAATACGGCCGAATTGGGGGCGCTTGGTTTGCCAATGATTGTGATCGTGCCCACCCAG CATTTGGCTGTGATGCAGGCATGGGATGGCTGGATTGGTTTGTTGGCTCGGCTCCCTGGATTGCGTTGGTGCATTGGTGT TTTGCTCAGTGCATGGCGGCTGCGTCGTCATGGATTCCTGGCTTGGCCCAATATCTCTGCTGGACGCATGGTGGTTCCGG AGCGAGTGGGCTCAATTTCGCCACAGGACATTGCTCATGAGGCGTCAGCTTGGCTGGAATCTCCTGAACGGCTCAGGGGG CTGCGCGAGGATCTGCGCAGCCTGCGTGGGCAACCTGGGGCTGTTTCTGCACTGGTTCGGCAGGTGCGTCGTTTGCTGCC CAAAGCTCTCGGTGCTTTTTAG
Upstream 100 bases:
>100_bases CACGCGGATGTGGTGGAATTGGTAGACACGCACGTTTGAGGGGCGTGTGGCTTCGGCCTTGCGAGTTCAAGTCTCGCCAT CCGCATTCTTTCCTTACAAC
Downstream 100 bases:
>100_bases ATTCGAAGGCTGTTTAGGGTCTGGCAGGTCCTCTTTCTTTTCCCTTCCATGTCCAGGTCTGATTCCTCCGCTTCCGATTC AGTGGATTGGATCAAGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTSLPPAVIPDTSLAVVLVSNGPGELATWVRPIAESLHRSILMRPRAASSPIDLRLVLVPCPNATGQEADAARRWIQFEQ ITPANQFWNLLFFPRRYGPWPRQGVVVFLGGDQFWSVLLSGRLGYRHLTYAEWVARWPRWNDCIAAMSPKVRDQLPRRFR DRCTVVGDLMADLSSLARAEAPLPQGDWVALLPGSKRAKLCVGVPFLLEAADQLARLRPGCRFLLPVAPTTSVKELESFM SSSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQEDHPAHGPLSQCDLALTTVGANTAELGALGLPMIVIVPTQ HLAVMQAWDGWIGLLARLPGLRWCIGVLLSAWRLRRHGFLAWPNISAGRMVVPERVGSISPQDIAHEASAWLESPERLRG LREDLRSLRGQPGAVSALVRQVRRLLPKALGAF
Sequences:
>Translated_433_residues MTSLPPAVIPDTSLAVVLVSNGPGELATWVRPIAESLHRSILMRPRAASSPIDLRLVLVPCPNATGQEADAARRWIQFEQ ITPANQFWNLLFFPRRYGPWPRQGVVVFLGGDQFWSVLLSGRLGYRHLTYAEWVARWPRWNDCIAAMSPKVRDQLPRRFR DRCTVVGDLMADLSSLARAEAPLPQGDWVALLPGSKRAKLCVGVPFLLEAADQLARLRPGCRFLLPVAPTTSVKELESFM SSSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQEDHPAHGPLSQCDLALTTVGANTAELGALGLPMIVIVPTQ HLAVMQAWDGWIGLLARLPGLRWCIGVLLSAWRLRRHGFLAWPNISAGRMVVPERVGSISPQDIAHEASAWLESPERLRG LREDLRSLRGQPGAVSALVRQVRRLLPKALGAF >Mature_432_residues TSLPPAVIPDTSLAVVLVSNGPGELATWVRPIAESLHRSILMRPRAASSPIDLRLVLVPCPNATGQEADAARRWIQFEQI TPANQFWNLLFFPRRYGPWPRQGVVVFLGGDQFWSVLLSGRLGYRHLTYAEWVARWPRWNDCIAAMSPKVRDQLPRRFRD RCTVVGDLMADLSSLARAEAPLPQGDWVALLPGSKRAKLCVGVPFLLEAADQLARLRPGCRFLLPVAPTTSVKELESFMS SSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQEDHPAHGPLSQCDLALTTVGANTAELGALGLPMIVIVPTQH LAVMQAWDGWIGLLARLPGLRWCIGVLLSAWRLRRHGFLAWPNISAGRMVVPERVGSISPQDIAHEASAWLESPERLRGL REDLRSLRGQPGAVSALVRQVRRLLPKALGAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47883; Mature: 47752
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLPPAVIPDTSLAVVLVSNGPGELATWVRPIAESLHRSILMRPRAASSPIDLRLVLVP CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE CPNATGQEADAARRWIQFEQITPANQFWNLLFFPRRYGPWPRQGVVVFLGGDQFWSVLLS CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCEEEEECCHHHHHHHHH GRLGYRHLTYAEWVARWPRWNDCIAAMSPKVRDQLPRRFRDRCTVVGDLMADLSSLARAE CCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APLPQGDWVALLPGSKRAKLCVGVPFLLEAADQLARLRPGCRFLLPVAPTTSVKELESFM CCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH SSSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQEDHPAHGPLSQCDLALTTVG CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHCEEEEECC ANTAELGALGLPMIVIVPTQHLAVMQAWDGWIGLLARLPGLRWCIGVLLSAWRLRRHGFL CCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEE AWPNISAGRMVVPERVGSISPQDIAHEASAWLESPERLRGLREDLRSLRGQPGAVSALVR ECCCCCCCCEECHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH QVRRLLPKALGAF HHHHHHHHHHCCC >Mature Secondary Structure TSLPPAVIPDTSLAVVLVSNGPGELATWVRPIAESLHRSILMRPRAASSPIDLRLVLVP CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE CPNATGQEADAARRWIQFEQITPANQFWNLLFFPRRYGPWPRQGVVVFLGGDQFWSVLLS CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCEEEEECCHHHHHHHHH GRLGYRHLTYAEWVARWPRWNDCIAAMSPKVRDQLPRRFRDRCTVVGDLMADLSSLARAE CCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APLPQGDWVALLPGSKRAKLCVGVPFLLEAADQLARLRPGCRFLLPVAPTTSVKELESFM CCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH SSSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQEDHPAHGPLSQCDLALTTVG CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHCEEEEECC ANTAELGALGLPMIVIVPTQHLAVMQAWDGWIGLLARLPGLRWCIGVLLSAWRLRRHGFL CCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEE AWPNISAGRMVVPERVGSISPQDIAHEASAWLESPERLRGLREDLRSLRGQPGAVSALVR ECCCCCCCCEECHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH QVRRLLPKALGAF HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA