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The map label for this gene is yfmR [H]

Identifier: 33863807

GI number: 33863807

Start: 1631238

End: 1633196

Strand: Direct

Name: yfmR [H]

Synonym: PMT1540

Alternate gene names: 33863807

Gene position: 1631238-1633196 (Clockwise)

Preceding gene: 33863806

Following gene: 33863808

Centisome position: 67.66

GC content: 53.45

Gene sequence:

>1959_bases
GTGAGCCTGATCAGCCTGATAGAGGCCTCGAAAGACTTCGGCATCAACACCCTGTTTGCCGACCTCACCCTGCACATCAA
CGAAGGAGAACGACTAGGGCTGATCGGACCGAATGGAGCCGGGAAATCGACGCTACTGAAGGTGCTCGCCGGAAAGGAAC
CCCTAGGAGAGGGTGAAAGGAGGTGCTCAGCGCGATTACGGGTAGAGCTCGTGGGACAGGAGAGCGCTGTAAACCCTGGC
CATACGGTGCTGCAAGAAGTCTTGGCCGGGTGCGGTGAAAAGAGAGAGCTTCTGCTGCGTTTCAACGAGCTCAGCAATTC
GATGGCCCGCAACCCCAACGATGCAACGCTTTTGGCTGAGTTAGGACAAGTCAGCCAGCGGATGGATGACGCCCAGGCCT
GGAGCTTGGAACAGCAATGTCAAGAGGTCCTTCAACGTCTTGGTATCACCGATCTAGAGCGGCCGGTTAAAGAACTCTCT
GGTGGGTATCGCAAGCGTGTCGGCCTTGCCTCCGCCTTGGTCGCCAGACCTGACGTTTTGCTGCTCGATGAGCCCACCAA
CCATCTCGATGCGGCAGCAGTGGAGTGGCTACAAAGTTGGCTCGATCGCTTTCCAGGCGCTTTGGTGCTTGTCACCCACG
ATCGTTACGTGCTCGATCGGGTGACACGCCGCATGGTGGAAGTAGATCGAGGCAAAGCCCATAACTATGCCGGCAACTAC
AGCACTTTTCTACAACAAAAGGCCGAACTTGAAGCTTCAGAAGCCTCCACTGCTCAAAAGTTCAAAGGGGTTTTAAGACG
AGAGCTGGCCTGGTTACGACAGGGTCCCAAAGCACGCAGTACCAAGCAGAAGGCACGCCTGCAGCGAATTGCGGAGATGC
GCGCAGAACCATTGCCTCAACTGCGGGGTTCCTTGAAGATGGCGAACGTAAGCAGGCGCATCGGCAAGCTAGTGATTGAG
GCGGAAGCCCTGCAAGTCACGGCCAATGGCAAGCCCGACAGTCCTCTGCTTCTAGACAACTTCACCTACAGCTTTAGTCC
AGAAGACCGCGTTGGCATCATCGGCCCCAATGGCAGTGGCAAATCCACATTGCTTGATTTAATCGCCGGCAGACGCCAAC
CCAACGGTGGAACACTGCGATTAGGTGAAACAGTGCACCTGGGATATCTCGACCAGCACACCGAGGACATCACCAAAGGC
AAAGGCCTAGATCGCAAAGTGATCGATTTTGTCGAAGAAGCTGCCTCTCAAATCATTCTGGGAGAAGAACAAATTACGGC
CTCTCAACTACTGGAACGCTTCCTATTTCCACCGGCTCAGCAGCACAGCCCCCTGGGGAAGCTCTCTGGGGGAGAACGAC
GCCGACTCACACTCTGCCGGATGCTGATCCAAGCACCGAATGTGCTGCTGCTTGATGAACCCACCAACGACCTAGATGTC
CAAACACTAAGCGTGCTGGAAGATTTCCTTGAGGATTTCCGCGGCTGCGTTGTCGTGGTCTCTCATGACCGCTATTTCCT
CGATCGCACAGTTGATCGTCTTTTCAACTTTGAGAATGGGCAATTAAAACGTTTTGAGGGCAATTACAGCGCCTTTCTTG
AACAGCAACGACGACAAGAGCGAGGTCTCAACGAAGCAAATGAGCCCAAATCGATCAGACTTTTGAAGGATTCTGGCCCA
TCTAGAATATCCACAAGATCCTCTCAAGAGGCAGAAAGCTCTTCATCCCAAGCCACAGAAAACAGCAAGCCAAGACGTCG
AAGCTTCAAGGAATCACGTGAACTAGAAGCTCTAAACATTGACATCCCACTGCTTGAAGCCAAGCGTTCTAACCTTGAGG
CTGCTTTGTCCTGTGGCGACGAAGACTTAACTCTTCTTAGTCAACAATTAGCCGAGCTAGTCGAAACATTGCACAGAGCT
GAAGAGCGCTGGCTCGAACTCAGCGAACTGACTGCATAA

Upstream 100 bases:

>100_bases
TGGTGTTAGCCCTGCGAAAGTTCGGCATGGACGCCGCTGCTGACGTCGGTGACAAGAGTGTGTTTGCTTACCTGAGCAAT
CCGCAAGCTAACGAAGCTCT

Downstream 100 bases:

>100_bases
GACGGCGCCAACGTCGATGATTCTAGCGCAATTCTGCATCATCTTATGTCCTTGCGAACAAGACTGGTGAGTTAGTCGGA
GTATCACAACATTGACAACT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 652; Mature: 651

Protein sequence:

>652_residues
MSLISLIEASKDFGINTLFADLTLHINEGERLGLIGPNGAGKSTLLKVLAGKEPLGEGERRCSARLRVELVGQESAVNPG
HTVLQEVLAGCGEKRELLLRFNELSNSMARNPNDATLLAELGQVSQRMDDAQAWSLEQQCQEVLQRLGITDLERPVKELS
GGYRKRVGLASALVARPDVLLLDEPTNHLDAAAVEWLQSWLDRFPGALVLVTHDRYVLDRVTRRMVEVDRGKAHNYAGNY
STFLQQKAELEASEASTAQKFKGVLRRELAWLRQGPKARSTKQKARLQRIAEMRAEPLPQLRGSLKMANVSRRIGKLVIE
AEALQVTANGKPDSPLLLDNFTYSFSPEDRVGIIGPNGSGKSTLLDLIAGRRQPNGGTLRLGETVHLGYLDQHTEDITKG
KGLDRKVIDFVEEAASQIILGEEQITASQLLERFLFPPAQQHSPLGKLSGGERRRLTLCRMLIQAPNVLLLDEPTNDLDV
QTLSVLEDFLEDFRGCVVVVSHDRYFLDRTVDRLFNFENGQLKRFEGNYSAFLEQQRRQERGLNEANEPKSIRLLKDSGP
SRISTRSSQEAESSSSQATENSKPRRRSFKESRELEALNIDIPLLEAKRSNLEAALSCGDEDLTLLSQQLAELVETLHRA
EERWLELSELTA

Sequences:

>Translated_652_residues
MSLISLIEASKDFGINTLFADLTLHINEGERLGLIGPNGAGKSTLLKVLAGKEPLGEGERRCSARLRVELVGQESAVNPG
HTVLQEVLAGCGEKRELLLRFNELSNSMARNPNDATLLAELGQVSQRMDDAQAWSLEQQCQEVLQRLGITDLERPVKELS
GGYRKRVGLASALVARPDVLLLDEPTNHLDAAAVEWLQSWLDRFPGALVLVTHDRYVLDRVTRRMVEVDRGKAHNYAGNY
STFLQQKAELEASEASTAQKFKGVLRRELAWLRQGPKARSTKQKARLQRIAEMRAEPLPQLRGSLKMANVSRRIGKLVIE
AEALQVTANGKPDSPLLLDNFTYSFSPEDRVGIIGPNGSGKSTLLDLIAGRRQPNGGTLRLGETVHLGYLDQHTEDITKG
KGLDRKVIDFVEEAASQIILGEEQITASQLLERFLFPPAQQHSPLGKLSGGERRRLTLCRMLIQAPNVLLLDEPTNDLDV
QTLSVLEDFLEDFRGCVVVVSHDRYFLDRTVDRLFNFENGQLKRFEGNYSAFLEQQRRQERGLNEANEPKSIRLLKDSGP
SRISTRSSQEAESSSSQATENSKPRRRSFKESRELEALNIDIPLLEAKRSNLEAALSCGDEDLTLLSQQLAELVETLHRA
EERWLELSELTA
>Mature_651_residues
SLISLIEASKDFGINTLFADLTLHINEGERLGLIGPNGAGKSTLLKVLAGKEPLGEGERRCSARLRVELVGQESAVNPGH
TVLQEVLAGCGEKRELLLRFNELSNSMARNPNDATLLAELGQVSQRMDDAQAWSLEQQCQEVLQRLGITDLERPVKELSG
GYRKRVGLASALVARPDVLLLDEPTNHLDAAAVEWLQSWLDRFPGALVLVTHDRYVLDRVTRRMVEVDRGKAHNYAGNYS
TFLQQKAELEASEASTAQKFKGVLRRELAWLRQGPKARSTKQKARLQRIAEMRAEPLPQLRGSLKMANVSRRIGKLVIEA
EALQVTANGKPDSPLLLDNFTYSFSPEDRVGIIGPNGSGKSTLLDLIAGRRQPNGGTLRLGETVHLGYLDQHTEDITKGK
GLDRKVIDFVEEAASQIILGEEQITASQLLERFLFPPAQQHSPLGKLSGGERRRLTLCRMLIQAPNVLLLDEPTNDLDVQ
TLSVLEDFLEDFRGCVVVVSHDRYFLDRTVDRLFNFENGQLKRFEGNYSAFLEQQRRQERGLNEANEPKSIRLLKDSGPS
RISTRSSQEAESSSSQATENSKPRRRSFKESRELEALNIDIPLLEAKRSNLEAALSCGDEDLTLLSQQLAELVETLHRAE
ERWLELSELTA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=553, Percent_Identity=30.7414104882459, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI10947137, Length=543, Percent_Identity=29.2817679558011, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI27881506, Length=543, Percent_Identity=29.2817679558011, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI10947135, Length=542, Percent_Identity=29.8892988929889, Blast_Score=183, Evalue=5e-46,
Organism=Homo sapiens, GI69354671, Length=542, Percent_Identity=29.8892988929889, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI73747915, Length=238, Percent_Identity=25.2100840336134, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI2367384, Length=540, Percent_Identity=38.1481481481481, Blast_Score=348, Evalue=5e-97,
Organism=Escherichia coli, GI1787182, Length=533, Percent_Identity=36.9606003752345, Blast_Score=329, Evalue=4e-91,
Organism=Escherichia coli, GI1789751, Length=662, Percent_Identity=31.7220543806647, Blast_Score=272, Evalue=4e-74,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=29.5668549905838, Blast_Score=224, Evalue=2e-59,
Organism=Escherichia coli, GI48994943, Length=620, Percent_Identity=22.5806451612903, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=31.7307692307692, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1787712, Length=255, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=28.1914893617021, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787089, Length=204, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788225, Length=208, Percent_Identity=29.3269230769231, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI48994997, Length=209, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789593, Length=215, Percent_Identity=27.4418604651163, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789891, Length=234, Percent_Identity=29.0598290598291, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=27.9620853080569, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI48994883, Length=254, Percent_Identity=26.7716535433071, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786975, Length=171, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1786703, Length=226, Percent_Identity=30.9734513274336, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1787029, Length=222, Percent_Identity=27.9279279279279, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786872, Length=235, Percent_Identity=27.6595744680851, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081834, Length=205, Percent_Identity=27.3170731707317, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1790544, Length=250, Percent_Identity=28, Blast_Score=63, Evalue=7e-11,
Organism=Escherichia coli, GI1786398, Length=239, Percent_Identity=28.0334728033473, Blast_Score=62, Evalue=8e-11,
Organism=Escherichia coli, GI1789873, Length=212, Percent_Identity=27.8301886792453, Blast_Score=62, Evalue=9e-11,
Organism=Escherichia coli, GI1787105, Length=219, Percent_Identity=29.2237442922374, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17559834, Length=543, Percent_Identity=30.0184162062615, Blast_Score=225, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=28.1191806331471, Blast_Score=208, Evalue=8e-54,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=30.1293900184843, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17567265, Length=305, Percent_Identity=26.8852459016393, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17511077, Length=284, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=239, Percent_Identity=25.1046025104602, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=254, Percent_Identity=25.5905511811024, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=31.6573556797021, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6321121, Length=552, Percent_Identity=28.0797101449275, Blast_Score=181, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6324314, Length=255, Percent_Identity=30.5882352941176, Blast_Score=124, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=393, Percent_Identity=26.2086513994911, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=27.2493573264781, Blast_Score=117, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24642252, Length=558, Percent_Identity=28.3154121863799, Blast_Score=215, Evalue=6e-56,
Organism=Drosophila melanogaster, GI18859989, Length=558, Percent_Identity=28.3154121863799, Blast_Score=215, Evalue=6e-56,
Organism=Drosophila melanogaster, GI24641342, Length=538, Percent_Identity=30.2973977695167, Blast_Score=212, Evalue=8e-55,
Organism=Drosophila melanogaster, GI24666836, Length=556, Percent_Identity=30.3956834532374, Blast_Score=210, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72728; Mature: 72596

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLISLIEASKDFGINTLFADLTLHINEGERLGLIGPNGAGKSTLLKVLAGKEPLGEGER
CCHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHH
RCSARLRVELVGQESAVNPGHTVLQEVLAGCGEKRELLLRFNELSNSMARNPNDATLLAE
HHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LGQVSQRMDDAQAWSLEQQCQEVLQRLGITDLERPVKELSGGYRKRVGLASALVARPDVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
LLDEPTNHLDAAAVEWLQSWLDRFPGALVLVTHDRYVLDRVTRRMVEVDRGKAHNYAGNY
EEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCH
STFLQQKAELEASEASTAQKFKGVLRRELAWLRQGPKARSTKQKARLQRIAEMRAEPLPQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH
LRGSLKMANVSRRIGKLVIEAEALQVTANGKPDSPLLLDNFTYSFSPEDRVGIIGPNGSG
HHCCHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCEEEECCEEECCCCCCEEEECCCCCC
KSTLLDLIAGRRQPNGGTLRLGETVHLGYLDQHTEDITKGKGLDRKVIDFVEEAASQIIL
HHHHHHHHHCCCCCCCCEEEECCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEC
GEEQITASQLLERFLFPPAQQHSPLGKLSGGERRRLTLCRMLIQAPNVLLLDEPTNDLDV
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHH
QTLSVLEDFLEDFRGCVVVVSHDRYFLDRTVDRLFNFENGQLKRFEGNYSAFLEQQRRQE
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
RGLNEANEPKSIRLLKDSGPSRISTRSSQEAESSSSQATENSKPRRRSFKESRELEALNI
CCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCHHHCCCCCCHHHHHHHHHCCCEEEEC
DIPLLEAKRSNLEAALSCGDEDLTLLSQQLAELVETLHRAEERWLELSELTA
CCEEHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLISLIEASKDFGINTLFADLTLHINEGERLGLIGPNGAGKSTLLKVLAGKEPLGEGER
CHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHH
RCSARLRVELVGQESAVNPGHTVLQEVLAGCGEKRELLLRFNELSNSMARNPNDATLLAE
HHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LGQVSQRMDDAQAWSLEQQCQEVLQRLGITDLERPVKELSGGYRKRVGLASALVARPDVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
LLDEPTNHLDAAAVEWLQSWLDRFPGALVLVTHDRYVLDRVTRRMVEVDRGKAHNYAGNY
EEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCH
STFLQQKAELEASEASTAQKFKGVLRRELAWLRQGPKARSTKQKARLQRIAEMRAEPLPQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH
LRGSLKMANVSRRIGKLVIEAEALQVTANGKPDSPLLLDNFTYSFSPEDRVGIIGPNGSG
HHCCHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCEEEECCEEECCCCCCEEEECCCCCC
KSTLLDLIAGRRQPNGGTLRLGETVHLGYLDQHTEDITKGKGLDRKVIDFVEEAASQIIL
HHHHHHHHHCCCCCCCCEEEECCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEC
GEEQITASQLLERFLFPPAQQHSPLGKLSGGERRRLTLCRMLIQAPNVLLLDEPTNDLDV
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHH
QTLSVLEDFLEDFRGCVVVVSHDRYFLDRTVDRLFNFENGQLKRFEGNYSAFLEQQRRQE
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
RGLNEANEPKSIRLLKDSGPSRISTRSSQEAESSSSQATENSKPRRRSFKESRELEALNI
CCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCHHHCCCCCCHHHHHHHHHCCCEEEEC
DIPLLEAKRSNLEAALSCGDEDLTLLSQQLAELVETLHRAEERWLELSELTA
CCEEHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]