| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863808
Identifier: 33863808
GI number: 33863808
Start: 1633355
End: 1633834
Strand: Direct
Name: 33863808
Synonym: PMT1541
Alternate gene names: NA
Gene position: 1633355-1633834 (Clockwise)
Preceding gene: 33863807
Following gene: 33863809
Centisome position: 67.75
GC content: 50.42
Gene sequence:
>480_bases TTGACCCGTATCCTTCAACCTCTGCCAAATTCATGGCAGTTGGGCGGCAATCATCTACAGAACAATGCTGGGCCATCAGT TCCCCAATCTGTCTCAGATATAGATCTTGCGACCAATCCACATGGTTGTAATTGGAAGCCTCGCAAGCTTCAAAATGGAC CCAAAGCGTTGACTGACAAAGCCAGAAGAAACGCATTGCTTCCACTCCAATACATCCGCGAAGCTGAGGCCACTGCGCTT TTGCCTCTTTGCAGAGAGCTCGCAAAACGTTTCTGGCCCGTTCATCCAGAACATCCTTTACTGCTGATCGATGAAATGGC GATCCTGCCGGTCTCTGATCCGTACCATGCCATCAGCCTCAATCTGCCTAATCAGCTAGGAGCCAATGGTGAAAAGCCTT GGCAATGGTGTTGTAACGGAAACCAAGTCAGGCCTCCCCCCATGGCGCAACCGATCAAAGTGCTTATGTTGTGGCAGTGA
Upstream 100 bases:
>100_bases CAAGACTGGTGAGTTAGTCGGAGTATCACAACATTGACAACTGGTTGCCGTCTATTGATCAGAGGGAGGCATCTCTAAGG CACTGATCCAGAAAACAAGT
Downstream 100 bases:
>100_bases TAGAGGCCGGCGCAGGCCAAGACCCTATGAAAACCATCGACGAGCACATTCAGAAGGATCAATCTGAGATCCAAGACGCC AAAGCCCAAGGCAACGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTRILQPLPNSWQLGGNHLQNNAGPSVPQSVSDIDLATNPHGCNWKPRKLQNGPKALTDKARRNALLPLQYIREAEATAL LPLCRELAKRFWPVHPEHPLLLIDEMAILPVSDPYHAISLNLPNQLGANGEKPWQWCCNGNQVRPPPMAQPIKVLMLWQ
Sequences:
>Translated_159_residues MTRILQPLPNSWQLGGNHLQNNAGPSVPQSVSDIDLATNPHGCNWKPRKLQNGPKALTDKARRNALLPLQYIREAEATAL LPLCRELAKRFWPVHPEHPLLLIDEMAILPVSDPYHAISLNLPNQLGANGEKPWQWCCNGNQVRPPPMAQPIKVLMLWQ >Mature_158_residues TRILQPLPNSWQLGGNHLQNNAGPSVPQSVSDIDLATNPHGCNWKPRKLQNGPKALTDKARRNALLPLQYIREAEATALL PLCRELAKRFWPVHPEHPLLLIDEMAILPVSDPYHAISLNLPNQLGANGEKPWQWCCNGNQVRPPPMAQPIKVLMLWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17861; Mature: 17730
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRILQPLPNSWQLGGNHLQNNAGPSVPQSVSDIDLATNPHGCNWKPRKLQNGPKALTDK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHH ARRNALLPLQYIREAEATALLPLCRELAKRFWPVHPEHPLLLIDEMAILPVSDPYHAISL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCCEEEEE NLPNQLGANGEKPWQWCCNGNQVRPPPMAQPIKVLMLWQ ECCHHHCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure TRILQPLPNSWQLGGNHLQNNAGPSVPQSVSDIDLATNPHGCNWKPRKLQNGPKALTDK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHH ARRNALLPLQYIREAEATALLPLCRELAKRFWPVHPEHPLLLIDEMAILPVSDPYHAISL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCCEEEEE NLPNQLGANGEKPWQWCCNGNQVRPPPMAQPIKVLMLWQ ECCHHHCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA