| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863788
Identifier: 33863788
GI number: 33863788
Start: 1610948
End: 1612471
Strand: Direct
Name: 33863788
Synonym: PMT1521
Alternate gene names: NA
Gene position: 1610948-1612471 (Clockwise)
Preceding gene: 33863787
Following gene: 33863789
Centisome position: 66.82
GC content: 45.21
Gene sequence:
>1524_bases ATGAGCACATTAGCGAATGGCTTGTCAAGCCCAATGGGATTTGCAGAGACAACTGCATCAAAAAAAGTATCCCAGAATTT CACGACTCCAATACCCTCAGGTATCCTCACTCCAGATACAGTTAAAACAAGAATAGGTACATTTAATTTCTTCGATGGAC TGCCTGACAAGGCAAGTGCAAAGCTGGCCTATGAAAATCTAGATTTCATCCGTGCGTACGAAACATTCTTGTCATTAATG CCTGCTGCGAGCATAGAAATGCTAAGGCAAGGTCATACAAAGATTGGGGTAGATGACTACAATGAAGTCATGCTAATGTC GCCTTTAGGATCCAACCCTATATTTCTCACAGGCAATACAGATACTGTTTATGGTTCTGTTTTCTTCGACCTAAGTAAAA CCGGACCGCTTGTAATCAATATCCCTGCGGGCCTTGGCCCAGGCACGATCAATGATGCATTTTTCCGCTTTGTCGCTGAC ACTGGTGCCCCCGGGCCTGACAGAGGAAAGGGAGGGAAATACTTAATCCTTGGACCCAGTGATCAGGCGCCATCAGAAAG CAAAGACTACTTTGTGTTCCGTTCTCCCACATACTCAAACTGGCTAATAATGAGGGCATTCTTGGATGAAAATGGCAGTC CTGACAAAGCAGTTCAGAGTTACAAATCAGATCTCCATATTTATCCTTATCACCTCAAAGATTCTCAACCTGAAATGAAA TTCATTGAAGCAGGAGATCTTGTATTTAACACTGTTCATGCCAACAATTTTCAATTTTTTGTCGAGCTGAATGAAGTTAT TCAGAGGGAACCCATCAACTTCCTAGATCCAGAAATTCGGGGACTCGCCTCCTCCATTGGGATGGAAAAAGGAGTGCCTT TTAATCCTACGCCTGCGTTACGAAGCACGATGGAGGAAGCGGTCCAAGTTGGCGTTGCTTATGCAAGGTCAGAGATGACA AGACCCAGGGATCGATCGGCATACCTCTACGACGGCAAACAATGGACTACTCCTTTCGTTGGTGGTAGTCATGAATGGCT TCGTGATGGAGGCAAAGGAGGGCGAAACTTAGACGCAAGGGCAATGTATTTCTGGCTTGCCACTGTCAATACTCCAGCCA TGGTGCTTGAAATGCCAGGAGTGGGCTCCCAGTATGGCCTGATTGCTACCGATTCCCAAAAGAAATTTCTCAATGGTGGC AAAAACTACAGACTCAACCTGCCAGCTAATATTCCTGCAAAGGATTTCTGGTCTTTTGTGGTCTATGACCCACAAACTCG TTCGGAACTACAGACCACACAAGCTCTACCAAGCAAGAACAGCAAGCGAGACAAAGACATCCTGATCAATGATGACGGAT CGGTTGATCTTTACTTTGGGCCCAAAGCTCCTAACGGGAAAGCTTCTAACTGGATTCAAACAATCCCTGAGAAAGGTTGG TTCGCTCTACTGCGTCTATATGGGCCACTTGAGTCTTGGTTTGACAAAAGTTGGCAGCCAAATGATATCCAAAAACTCGA CTAA
Upstream 100 bases:
>100_bases AGTACAATAAATAAACAGAAAGAGCGATTCAATCATGATTAATCCATTCACTCAGTCTATCTTTAATCCCAGAGTCTCTT CGGTGATCGCGGGGATACTA
Downstream 100 bases:
>100_bases TAACAGCAATCATCACCTCATCAACAATGAATTTCACTCCAATGAAAACCTCACATGCTTTCCAAATTGCCGTTTCCGCA CTCGCCCTTACATCATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MSTLANGLSSPMGFAETTASKKVSQNFTTPIPSGILTPDTVKTRIGTFNFFDGLPDKASAKLAYENLDFIRAYETFLSLM PAASIEMLRQGHTKIGVDDYNEVMLMSPLGSNPIFLTGNTDTVYGSVFFDLSKTGPLVINIPAGLGPGTINDAFFRFVAD TGAPGPDRGKGGKYLILGPSDQAPSESKDYFVFRSPTYSNWLIMRAFLDENGSPDKAVQSYKSDLHIYPYHLKDSQPEMK FIEAGDLVFNTVHANNFQFFVELNEVIQREPINFLDPEIRGLASSIGMEKGVPFNPTPALRSTMEEAVQVGVAYARSEMT RPRDRSAYLYDGKQWTTPFVGGSHEWLRDGGKGGRNLDARAMYFWLATVNTPAMVLEMPGVGSQYGLIATDSQKKFLNGG KNYRLNLPANIPAKDFWSFVVYDPQTRSELQTTQALPSKNSKRDKDILINDDGSVDLYFGPKAPNGKASNWIQTIPEKGW FALLRLYGPLESWFDKSWQPNDIQKLD
Sequences:
>Translated_507_residues MSTLANGLSSPMGFAETTASKKVSQNFTTPIPSGILTPDTVKTRIGTFNFFDGLPDKASAKLAYENLDFIRAYETFLSLM PAASIEMLRQGHTKIGVDDYNEVMLMSPLGSNPIFLTGNTDTVYGSVFFDLSKTGPLVINIPAGLGPGTINDAFFRFVAD TGAPGPDRGKGGKYLILGPSDQAPSESKDYFVFRSPTYSNWLIMRAFLDENGSPDKAVQSYKSDLHIYPYHLKDSQPEMK FIEAGDLVFNTVHANNFQFFVELNEVIQREPINFLDPEIRGLASSIGMEKGVPFNPTPALRSTMEEAVQVGVAYARSEMT RPRDRSAYLYDGKQWTTPFVGGSHEWLRDGGKGGRNLDARAMYFWLATVNTPAMVLEMPGVGSQYGLIATDSQKKFLNGG KNYRLNLPANIPAKDFWSFVVYDPQTRSELQTTQALPSKNSKRDKDILINDDGSVDLYFGPKAPNGKASNWIQTIPEKGW FALLRLYGPLESWFDKSWQPNDIQKLD >Mature_506_residues STLANGLSSPMGFAETTASKKVSQNFTTPIPSGILTPDTVKTRIGTFNFFDGLPDKASAKLAYENLDFIRAYETFLSLMP AASIEMLRQGHTKIGVDDYNEVMLMSPLGSNPIFLTGNTDTVYGSVFFDLSKTGPLVINIPAGLGPGTINDAFFRFVADT GAPGPDRGKGGKYLILGPSDQAPSESKDYFVFRSPTYSNWLIMRAFLDENGSPDKAVQSYKSDLHIYPYHLKDSQPEMKF IEAGDLVFNTVHANNFQFFVELNEVIQREPINFLDPEIRGLASSIGMEKGVPFNPTPALRSTMEEAVQVGVAYARSEMTR PRDRSAYLYDGKQWTTPFVGGSHEWLRDGGKGGRNLDARAMYFWLATVNTPAMVLEMPGVGSQYGLIATDSQKKFLNGGK NYRLNLPANIPAKDFWSFVVYDPQTRSELQTTQALPSKNSKRDKDILINDDGSVDLYFGPKAPNGKASNWIQTIPEKGWF ALLRLYGPLESWFDKSWQPNDIQKLD
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56267; Mature: 56136
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLANGLSSPMGFAETTASKKVSQNFTTPIPSGILTPDTVKTRIGTFNFFDGLPDKASA CCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCC KLAYENLDFIRAYETFLSLMPAASIEMLRQGHTKIGVDDYNEVMLMSPLGSNPIFLTGNT EEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEECCCCCCCEEEECCCCCCCEEEECCC DTVYGSVFFDLSKTGPLVINIPAGLGPGTINDAFFRFVADTGAPGPDRGKGGKYLILGPS CEEEEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC DQAPSESKDYFVFRSPTYSNWLIMRAFLDENGSPDKAVQSYKSDLHIYPYHLKDSQPEMK CCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEE FIEAGDLVFNTVHANNFQFFVELNEVIQREPINFLDPEIRGLASSIGMEKGVPFNPTPAL EEECCCEEEEEEECCCEEEEEEEHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHH RSTMEEAVQVGVAYARSEMTRPRDRSAYLYDGKQWTTPFVGGSHEWLRDGGKGGRNLDAR HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCCCCHHHHHCCCCCCCCCCCE AMYFWLATVNTPAMVLEMPGVGSQYGLIATDSQKKFLNGGKNYRLNLPANIPAKDFWSFV EEEEEEEECCCCEEEEECCCCCCCCCEEEECCHHHHHCCCCCEEEECCCCCCHHHCEEEE VYDPQTRSELQTTQALPSKNSKRDKDILINDDGSVDLYFGPKAPNGKASNWIQTIPEKGW EECCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCHH FALLRLYGPLESWFDKSWQPNDIQKLD HHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure STLANGLSSPMGFAETTASKKVSQNFTTPIPSGILTPDTVKTRIGTFNFFDGLPDKASA CHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCC KLAYENLDFIRAYETFLSLMPAASIEMLRQGHTKIGVDDYNEVMLMSPLGSNPIFLTGNT EEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEECCCCCCCEEEECCCCCCCEEEECCC DTVYGSVFFDLSKTGPLVINIPAGLGPGTINDAFFRFVADTGAPGPDRGKGGKYLILGPS CEEEEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC DQAPSESKDYFVFRSPTYSNWLIMRAFLDENGSPDKAVQSYKSDLHIYPYHLKDSQPEMK CCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEE FIEAGDLVFNTVHANNFQFFVELNEVIQREPINFLDPEIRGLASSIGMEKGVPFNPTPAL EEECCCEEEEEEECCCEEEEEEEHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHH RSTMEEAVQVGVAYARSEMTRPRDRSAYLYDGKQWTTPFVGGSHEWLRDGGKGGRNLDAR HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCCCCHHHHHCCCCCCCCCCCE AMYFWLATVNTPAMVLEMPGVGSQYGLIATDSQKKFLNGGKNYRLNLPANIPAKDFWSFV EEEEEEEECCCCEEEEECCCCCCCCCEEEECCHHHHHCCCCCEEEECCCCCCHHHCEEEE VYDPQTRSELQTTQALPSKNSKRDKDILINDDGSVDLYFGPKAPNGKASNWIQTIPEKGW EECCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCHH FALLRLYGPLESWFDKSWQPNDIQKLD HHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA