| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863789
Identifier: 33863789
GI number: 33863789
Start: 1612498
End: 1614069
Strand: Direct
Name: 33863789
Synonym: PMT1522
Alternate gene names: NA
Gene position: 1612498-1614069 (Clockwise)
Preceding gene: 33863788
Following gene: 33863790
Centisome position: 66.88
GC content: 46.44
Gene sequence:
>1572_bases ATGAATTTCACTCCAATGAAAACCTCACATGCTTTCCAAATTGCCGTTTCCGCACTCGCCCTTACATCATTATCCTGTGG CCTAGTTGCCAGAGCCAAAGATCAAATACCCAAGGGTTTCAATACTCCGATCCCTCAAGATATTCTAACGCCAGACAAAG TGAAAACCCGCATAGGGGATCTCAACTATTTTGATGGTCTACCTGATGATCAGACGATTGAACGCGCTCGTTATCAAGTT GACCTTGGCCGTGGAGTAAGAGCATTTCTAAACTTCATTCCTGCAGCTTCCATGGAAGTGATGTATGTAGGTCATCGTGA TGACTATGGCATCAAATCAAGTAACCAGGTAGGGCTTTTTGAAAATTTAATGAGCTCAGACTCGCTCTGGCTCACCGGAA ATACTGACACGGTCTACGCTTCTACCTTCCTCGATCTAAATAATGGCCCGATCGTCATTGAAGTACCACCAGGGATGGGT CCTGGCACGGTCAACGATGCCTATTTCCGCTTTATTGTGGACATGGGTGGACCGGGTCCCGACAAAGGCAAAGGAGGCAA ATATTTAATCGTCCCTGAGAGCTATTCAGGAGTTATCCCAGAGGGCTATTTTGTTGCCAAAACTCCCAGCAGAATTAACT GGCTGATCTTACGAGGATTCCTTGATCAGGGAGGAAAGACTGATACTGCTATCAACAACTTTCAGAAAGGTCTGAAAATT TATCCTCTTGCAGAAAAGAATGCTCCTCCTGCGATGGAATTCAAGAATTTCACAGGCAAAAATGTTAATACAATCCACGC CAACAACTACAGCTTCTACGATGAACTCAATGATGTAATTCAGCGAGAGTCATCATCTGTTTTCTCTCCAGAGCTACTTG GAGTATTGGCAGCAATTGGGATCGAGAAGGGTAAAAGCTTCAATCCCGATGCGCGTATGAAAGATATTCTTATCGAAGCA GTAGCGATTGGTAACGCTACTGCTCGCGCAATTACATTTTTGCCACGTGATCCCAACACTTTCATCTATGAAGATCAGAC GGGTGGCTGGAAAACAGGTTTCCTTGGTGGAAGCTATGAGTGGCTTAAAGACAAGGGGCAGGGCGGACGCTTTATCGATG CCCGCAGCCTTTACTTCTATCTTGCAACAGTCAATACACCGGCCATGCAGCTTGAGATTCCAGGCTTAGGTTCGCAATAC GCCTACACCGCAAGCGATGCGGATGGCAATTACCTCGATGGCAGTTCCACATACAAACTCACGATTCCAGCCAATGCGCC TGCAAAGGATTTCTGGTCGTTTGTGGTTTACGATCCCCAGACCCGCTCCATGCTGCAGAGCAAAGAACAGCCCTATCCAA GTAAAAACAGTAAACGCAACCAAGACATGCTGGTGAATGATGATGGTTCAGTAGATCTTTACTTCGGGCCCAAAGCACCC GAAGGGAAAAAGACAAACTGGATCAAAACCATCCCCAGTAAAGGTTGGTTCGGGATCCTGCGGCTCTATGGTCCACTTGA TCCCTGGTTCAATCAAACCTGGAAGCTGGGAGCCATTAAAAAGATGAACTGA
Upstream 100 bases:
>100_bases TGCGTCTATATGGGCCACTTGAGTCTTGGTTTGACAAAAGTTGGCAGCCAAATGATATCCAAAAACTCGACTAATAACAG CAATCATCACCTCATCAACA
Downstream 100 bases:
>100_bases TTGCCAAGACGGATTGCCAAGACGTTGATCGTTCAGGCAACCGAGGTTGATTTGAATAGGGCATAGTACTGGTTATCATT CTTAGCAAGTTACTGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MNFTPMKTSHAFQIAVSALALTSLSCGLVARAKDQIPKGFNTPIPQDILTPDKVKTRIGDLNYFDGLPDDQTIERARYQV DLGRGVRAFLNFIPAASMEVMYVGHRDDYGIKSSNQVGLFENLMSSDSLWLTGNTDTVYASTFLDLNNGPIVIEVPPGMG PGTVNDAYFRFIVDMGGPGPDKGKGGKYLIVPESYSGVIPEGYFVAKTPSRINWLILRGFLDQGGKTDTAINNFQKGLKI YPLAEKNAPPAMEFKNFTGKNVNTIHANNYSFYDELNDVIQRESSSVFSPELLGVLAAIGIEKGKSFNPDARMKDILIEA VAIGNATARAITFLPRDPNTFIYEDQTGGWKTGFLGGSYEWLKDKGQGGRFIDARSLYFYLATVNTPAMQLEIPGLGSQY AYTASDADGNYLDGSSTYKLTIPANAPAKDFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAP EGKKTNWIKTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN
Sequences:
>Translated_523_residues MNFTPMKTSHAFQIAVSALALTSLSCGLVARAKDQIPKGFNTPIPQDILTPDKVKTRIGDLNYFDGLPDDQTIERARYQV DLGRGVRAFLNFIPAASMEVMYVGHRDDYGIKSSNQVGLFENLMSSDSLWLTGNTDTVYASTFLDLNNGPIVIEVPPGMG PGTVNDAYFRFIVDMGGPGPDKGKGGKYLIVPESYSGVIPEGYFVAKTPSRINWLILRGFLDQGGKTDTAINNFQKGLKI YPLAEKNAPPAMEFKNFTGKNVNTIHANNYSFYDELNDVIQRESSSVFSPELLGVLAAIGIEKGKSFNPDARMKDILIEA VAIGNATARAITFLPRDPNTFIYEDQTGGWKTGFLGGSYEWLKDKGQGGRFIDARSLYFYLATVNTPAMQLEIPGLGSQY AYTASDADGNYLDGSSTYKLTIPANAPAKDFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAP EGKKTNWIKTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN >Mature_523_residues MNFTPMKTSHAFQIAVSALALTSLSCGLVARAKDQIPKGFNTPIPQDILTPDKVKTRIGDLNYFDGLPDDQTIERARYQV DLGRGVRAFLNFIPAASMEVMYVGHRDDYGIKSSNQVGLFENLMSSDSLWLTGNTDTVYASTFLDLNNGPIVIEVPPGMG PGTVNDAYFRFIVDMGGPGPDKGKGGKYLIVPESYSGVIPEGYFVAKTPSRINWLILRGFLDQGGKTDTAINNFQKGLKI YPLAEKNAPPAMEFKNFTGKNVNTIHANNYSFYDELNDVIQRESSSVFSPELLGVLAAIGIEKGKSFNPDARMKDILIEA VAIGNATARAITFLPRDPNTFIYEDQTGGWKTGFLGGSYEWLKDKGQGGRFIDARSLYFYLATVNTPAMQLEIPGLGSQY AYTASDADGNYLDGSSTYKLTIPANAPAKDFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAP EGKKTNWIKTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57784; Mature: 57784
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFTPMKTSHAFQIAVSALALTSLSCGLVARAKDQIPKGFNTPIPQDILTPDKVKTRIGD CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCHHHCCCHHHHHHHCC LNYFDGLPDDQTIERARYQVDLGRGVRAFLNFIPAASMEVMYVGHRDDYGIKSSNQVGLF CHHCCCCCCCHHHHHHHEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHH ENLMSSDSLWLTGNTDTVYASTFLDLNNGPIVIEVPPGMGPGTVNDAYFRFIVDMGGPGP HHHHCCCCEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCC DKGKGGKYLIVPESYSGVIPEGYFVAKTPSRINWLILRGFLDQGGKTDTAINNFQKGLKI CCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEHHCCCCCCHHHHHHHHCCCEE YPLAEKNAPPAMEFKNFTGKNVNTIHANNYSFYDELNDVIQRESSSVFSPELLGVLAAIG EEECCCCCCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IEKGKSFNPDARMKDILIEAVAIGNATARAITFLPRDPNTFIYEDQTGGWKTGFLGGSYE HCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCHH WLKDKGQGGRFIDARSLYFYLATVNTPAMQLEIPGLGSQYAYTASDADGNYLDGSSTYKL HHHCCCCCCCEEEECEEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCEECCCCEEEE TIPANAPAKDFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAP EECCCCCHHHHEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCC EGKKTNWIKTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN CCCCCCEEEECCCCCCEEEEEECCCCCHHHCCCEEECEEECCC >Mature Secondary Structure MNFTPMKTSHAFQIAVSALALTSLSCGLVARAKDQIPKGFNTPIPQDILTPDKVKTRIGD CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCHHHCCCHHHHHHHCC LNYFDGLPDDQTIERARYQVDLGRGVRAFLNFIPAASMEVMYVGHRDDYGIKSSNQVGLF CHHCCCCCCCHHHHHHHEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHH ENLMSSDSLWLTGNTDTVYASTFLDLNNGPIVIEVPPGMGPGTVNDAYFRFIVDMGGPGP HHHHCCCCEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCC DKGKGGKYLIVPESYSGVIPEGYFVAKTPSRINWLILRGFLDQGGKTDTAINNFQKGLKI CCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEHHCCCCCCHHHHHHHHCCCEE YPLAEKNAPPAMEFKNFTGKNVNTIHANNYSFYDELNDVIQRESSSVFSPELLGVLAAIG EEECCCCCCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IEKGKSFNPDARMKDILIEAVAIGNATARAITFLPRDPNTFIYEDQTGGWKTGFLGGSYE HCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCHH WLKDKGQGGRFIDARSLYFYLATVNTPAMQLEIPGLGSQYAYTASDADGNYLDGSSTYKL HHHCCCCCCCEEEECEEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCEECCCCEEEE TIPANAPAKDFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAP EECCCCCHHHHEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCC EGKKTNWIKTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN CCCCCCEEEECCCCCCEEEEEECCCCCHHHCCCEEECEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA