| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863757
Identifier: 33863757
GI number: 33863757
Start: 1575235
End: 1576008
Strand: Direct
Name: 33863757
Synonym: PMT1490
Alternate gene names: NA
Gene position: 1575235-1576008 (Clockwise)
Preceding gene: 33863756
Following gene: 33863758
Centisome position: 65.34
GC content: 55.17
Gene sequence:
>774_bases GTGGCTGGAGTGAGCCCCTTGAGCAATCGCTGGTCAAAACAAGTGTTGAGCAACTTTGAGCAAGCTGCAAGCACTTACAA CAGCCAGGCGCAATTACAACGTGCCGTTGCCTGGAGGCTCGCCAGACAGTGTGCTCGGCAGCACATTCCAGCAGGGTTCT GGGTAGACCTCGGTTCAGGTACAGGCCTAATGGCAGATGCTCTGGAGGCCTGCAATCCCCACCAAGCTGTCCTCCGCGTG GATGGCTGTCACGAGATGCTGAAACATCATCACCACTCCAGCCAAACATTGCTGTGGGATCTCAATCTGGGCGTTCCCTC ATGGCCCCAACTACCTAGTTTGCTGGCCTCGAGTTTTGCCCTTCACTGGCTGATTAACCCTTTAGAACGACTACATGAAT GGATGGCCGCTCTCACTCCTGAAGGCTGGCTGGCATTGGCTCTGCCAGTCGAAGGAAGCTTCCCCCAGTGGCACCAAGCA GCAGCAACAGCAGGCGTGAGCTGCACAGCTCTGCCATTCCCCTCCCAAGCGTCATTGCTTGATGTGCTGTCCAGCAATAA CATCCGCCATCAACAGCTACACCAGTTCACCCAACAGAGTCCTGAAGTCTTTCAGCTCTTGAAACCAATGCGCCAAATTG GTGCCCAGGCCAGCCCTTGCTCAACCATGGGGGTTGGCAACTGGCGCCATCTCAAACAAGCCTGGCCACGTTGCCAGAAC AGTGGAGATGCACAACTCACATGGCTGATCCAACTGCTTTTAATCCAGCGATGA
Upstream 100 bases:
>100_bases AAGCCCTGCTCAACCATCTACAAAGCCCCCCTTGCCATTGGATCTTGCCTGAAGCGGGGCATGCCTTGCTGATACCCGGA CTCATTGAACGCGTGCACAA
Downstream 100 bases:
>100_bases CTGAGGCAACGACTCCTCTAATCGTCTGCGGCACAGACACCAACGTCGGCAAGACCGTGGTGAGTGCATTGCTAGTGCAA GGATTAGTTGCCACCTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: SAM Dependent Methyltransferase; SAM-Dependent Methyltransferase; Biotin Synthesis Protein BioC; Biotin Biosynthesis Protein BioC; Biotin Biosynthesis
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MAGVSPLSNRWSKQVLSNFEQAASTYNSQAQLQRAVAWRLARQCARQHIPAGFWVDLGSGTGLMADALEACNPHQAVLRV DGCHEMLKHHHHSSQTLLWDLNLGVPSWPQLPSLLASSFALHWLINPLERLHEWMAALTPEGWLALALPVEGSFPQWHQA AATAGVSCTALPFPSQASLLDVLSSNNIRHQQLHQFTQQSPEVFQLLKPMRQIGAQASPCSTMGVGNWRHLKQAWPRCQN SGDAQLTWLIQLLLIQR
Sequences:
>Translated_257_residues MAGVSPLSNRWSKQVLSNFEQAASTYNSQAQLQRAVAWRLARQCARQHIPAGFWVDLGSGTGLMADALEACNPHQAVLRV DGCHEMLKHHHHSSQTLLWDLNLGVPSWPQLPSLLASSFALHWLINPLERLHEWMAALTPEGWLALALPVEGSFPQWHQA AATAGVSCTALPFPSQASLLDVLSSNNIRHQQLHQFTQQSPEVFQLLKPMRQIGAQASPCSTMGVGNWRHLKQAWPRCQN SGDAQLTWLIQLLLIQR >Mature_256_residues AGVSPLSNRWSKQVLSNFEQAASTYNSQAQLQRAVAWRLARQCARQHIPAGFWVDLGSGTGLMADALEACNPHQAVLRVD GCHEMLKHHHHSSQTLLWDLNLGVPSWPQLPSLLASSFALHWLINPLERLHEWMAALTPEGWLALALPVEGSFPQWHQAA ATAGVSCTALPFPSQASLLDVLSSNNIRHQQLHQFTQQSPEVFQLLKPMRQIGAQASPCSTMGVGNWRHLKQAWPRCQNS GDAQLTWLIQLLLIQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28600; Mature: 28469
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVSPLSNRWSKQVLSNFEQAASTYNSQAQLQRAVAWRLARQCARQHIPAGFWVDLGSG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC TGLMADALEACNPHQAVLRVDGCHEMLKHHHHSSQTLLWDLNLGVPSWPQLPSLLASSFA CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHH LHWLINPLERLHEWMAALTPEGWLALALPVEGSFPQWHQAAATAGVSCTALPFPSQASLL HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEECCCCCHHHHH DVLSSNNIRHQQLHQFTQQSPEVFQLLKPMRQIGAQASPCSTMGVGNWRHLKQAWPRCQN HHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC SGDAQLTWLIQLLLIQR CCCHHHHHHHHHHHHCC >Mature Secondary Structure AGVSPLSNRWSKQVLSNFEQAASTYNSQAQLQRAVAWRLARQCARQHIPAGFWVDLGSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC TGLMADALEACNPHQAVLRVDGCHEMLKHHHHSSQTLLWDLNLGVPSWPQLPSLLASSFA CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHH LHWLINPLERLHEWMAALTPEGWLALALPVEGSFPQWHQAAATAGVSCTALPFPSQASLL HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEECCCCCHHHHH DVLSSNNIRHQQLHQFTQQSPEVFQLLKPMRQIGAQASPCSTMGVGNWRHLKQAWPRCQN HHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC SGDAQLTWLIQLLLIQR CCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA