| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is groES [H]
Identifier: 33863717
GI number: 33863717
Start: 1537160
End: 1537471
Strand: Reverse
Name: groES [H]
Synonym: PMT1450
Alternate gene names: 33863717
Gene position: 1537471-1537160 (Counterclockwise)
Preceding gene: 33863721
Following gene: 33863716
Centisome position: 63.77
GC content: 54.49
Gene sequence:
>312_bases ATGGCAGCTGTTTCTCTCAGCGTCTCCACCGTTAAGCCTCTCGGAGATCGCGTTTTTGTGAAAGTCTCTGAATCAGAGGA GAAAACTGCGGGCGGCATCCTTTTGCCTGATACCGCCAAGGAAAAGCCCCAGGTGGGCGAGGTGGTTCAAGTTGGCCCTG GAAAGCGCAATGACGATGGCTCCCGCCAGGCCCCCGAAGTGGGAGTTGGTGACAAGGTTCTTTACAGCAAGTACGCAGGT ACAGACATCAAGCTCAGCACAGATGAGTACGTGCTGTTGTCCGAGAAGGACATCCTTGCTGTCGTCAACTGA
Upstream 100 bases:
>100_bases AGCATCAACACACATAGGGTTGGCACTCAATGGCCACGAGTGCTACTCCAGGTCGTTATGTGGTGCTTCGGCGCCCTGTT CTTGCTCTTTCAATACACCC
Downstream 100 bases:
>100_bases GCTTTGCGGCTGACTCTGACTTTCAGCTGCCACCGGCTTTCAACTGACCAAATCCATCATTTTTAAAGGACAACGCCTCC CATGGCTAAGCGCATTATTT
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAG TDIKLSTDEYVLLSEKDILAVVN
Sequences:
>Translated_103_residues MAAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAG TDIKLSTDEYVLLSEKDILAVVN >Mature_102_residues AAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGT DIKLSTDEYVLLSEKDILAVVN
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
Organism=Escherichia coli, GI1790585, Length=94, Percent_Identity=41.4893617021277, Blast_Score=67, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17555568, Length=96, Percent_Identity=40.625, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324594, Length=101, Percent_Identity=40.5940594059406, Blast_Score=75, Evalue=2e-15, Organism=Drosophila melanogaster, GI21358317, Length=96, Percent_Identity=45.8333333333333, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI21356029, Length=104, Percent_Identity=40.3846153846154, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 10889; Mature: 10758
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDG CCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCC SRQAPEVGVGDKVLYSKYAGTDIKLSTDEYVLLSEKDILAVVN CCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCEEEEEC >Mature Secondary Structure AAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDG CEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCC SRQAPEVGVGDKVLYSKYAGTDIKLSTDEYVLLSEKDILAVVN CCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA