Click here to switch to the map view.

The map label for this gene is 33863721

Identifier: 33863721

GI number: 33863721

Start: 1540461

End: 1540985

Strand: Reverse

Name: 33863721

Synonym: PMT1454

Alternate gene names: NA

Gene position: 1540985-1540461 (Counterclockwise)

Preceding gene: 33863723

Following gene: 33863717

Centisome position: 63.92

GC content: 56.0

Gene sequence:

>525_bases
ATGACGGTTTCCGAAGGCGCTGCCGCTGATCAAGAGGTCGCGAGCACGGCCGCTGCGGTGGCTGAGGCACATCCACAGGC
CACGACGGAGGTCGTTGAGGATCAGGCGCAACCCAAGGAGGAGCCCAAGGAAGGCCGACCTGTGATGCGTGGTGGCAGTG
CTGCTCTAGCGACTGCAACGATCGATGCTGATGGTGTGCCTTCTGGATATACCCCAAAGGCCGATGAAGGTCGTTTCTTG
CTGAAGATTCTGTGGCTGCCAGACAACGTTGCTCTGGCTGTTGATCAAATCGTTGGCGGTGGCCCCAGCCCTCTTACGGC
TTACTTTTTCTGGCCTCGCGAAGATGCATGGGAAACACTGAAAGGTGAGCTAGAAGGAAAGAGCTGGATCACCGATAACG
AGCGCGTTGAGGTGCTCAATAAGGCCACGGAAGTGATCAACTACTGGCAGGAAGAGGGCAAGGGTAAGAATCTCGAAGAA
GCCAAGCTCAAGTTCCCAGATGTCACCTTTTGCGGTACGGCTTAA

Upstream 100 bases:

>100_bases
TCGATGTCAAACAGCAGCAGGCCTTGCAGGTTCAGTGGATAGAGAGTGTTGAGCGACTGTTAGGTTAGTTGTTTGTTCAG
ATTCCTTGAGCGCAGAGAGC

Downstream 100 bases:

>100_bases
TCAAGCCAGCCGAACGAATTAATTCTGCAGACCGGCTCCGCCTTTAAGGCGGAGTTTTTTAATGGGGAAACTGAAGCGGA
GGCTGCATGGGCGAGCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Ycf65-like protein [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTVSEGAAADQEVASTAAAVAEAHPQATTEVVEDQAQPKEEPKEGRPVMRGGSAALATATIDADGVPSGYTPKADEGRFL
LKILWLPDNVALAVDQIVGGGPSPLTAYFFWPREDAWETLKGELEGKSWITDNERVEVLNKATEVINYWQEEGKGKNLEE
AKLKFPDVTFCGTA

Sequences:

>Translated_174_residues
MTVSEGAAADQEVASTAAAVAEAHPQATTEVVEDQAQPKEEPKEGRPVMRGGSAALATATIDADGVPSGYTPKADEGRFL
LKILWLPDNVALAVDQIVGGGPSPLTAYFFWPREDAWETLKGELEGKSWITDNERVEVLNKATEVINYWQEEGKGKNLEE
AKLKFPDVTFCGTA
>Mature_173_residues
TVSEGAAADQEVASTAAAVAEAHPQATTEVVEDQAQPKEEPKEGRPVMRGGSAALATATIDADGVPSGYTPKADEGRFLL
KILWLPDNVALAVDQIVGGGPSPLTAYFFWPREDAWETLKGELEGKSWITDNERVEVLNKATEVINYWQEEGKGKNLEEA
KLKFPDVTFCGTA

Specific function: Probably a ribosomal protein or a ribosome-associated protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PSRP3/ycf65 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006924
- ProDom:   PD015453 [H]

Pfam domain/function: PF04839 PSRP-3_Ycf65 [H]

EC number: NA

Molecular weight: Translated: 18719; Mature: 18588

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSEGAAADQEVASTAAAVAEAHPQATTEVVEDQAQPKEEPKEGRPVMRGGSAALATAT
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEE
IDADGVPSGYTPKADEGRFLLKILWLPDNVALAVDQIVGGGPSPLTAYFFWPREDAWETL
ECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH
KGELEGKSWITDNERVEVLNKATEVINYWQEEGKGKNLEEAKLKFPDVTFCGTA
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEECCCC
>Mature Secondary Structure 
TVSEGAAADQEVASTAAAVAEAHPQATTEVVEDQAQPKEEPKEGRPVMRGGSAALATAT
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEE
IDADGVPSGYTPKADEGRFLLKILWLPDNVALAVDQIVGGGPSPLTAYFFWPREDAWETL
ECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH
KGELEGKSWITDNERVEVLNKATEVINYWQEEGKGKNLEEAKLKFPDVTFCGTA
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]