| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is rpmH [H]
Identifier: 33863635
GI number: 33863635
Start: 1453877
End: 1454014
Strand: Direct
Name: rpmH [H]
Synonym: PMT1368
Alternate gene names: 33863635
Gene position: 1453877-1454014 (Clockwise)
Preceding gene: 33863634
Following gene: 33863636
Centisome position: 60.31
GC content: 53.62
Gene sequence:
>138_bases ATGACAAAAAGAACCTTTGGTGGAACCAGCCGCAAGAGAAAACGCGTCTCAGGATTTCGTGTGCGCATGCGAAATCACAC TGGTCGAAGAGTGATCCGCAGTCGCCGAAAACGTGGCCGTGCGCGTCTCGCTGTCTAA
Upstream 100 bases:
>100_bases AGATGTACCAATGGGCGGCTACCTTGGTAGCTGGCTGATTGACATCAACTGAACTGATAAGTTGGTGGACTGAAAAAAGA CTGTACGCCGTTCTCCTTCA
Downstream 100 bases:
>100_bases TCCATAACACTGCGGGTCAATCACTCAAATCACGCCACTTGCTCAGGAAGCCAACCTCCAATGGTGCTGCCAGCATCAAT GCGATTACGGGGAAGCCGAT
Product: 50S ribosomal protein L34
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MTKRTFGGTSRKRKRVSGFRVRMRNHTGRRVIRSRRKRGRARLAV
Sequences:
>Translated_45_residues MTKRTFGGTSRKRKRVSGFRVRMRNHTGRRVIRSRRKRGRARLAV >Mature_44_residues TKRTFGGTSRKRKRVSGFRVRMRNHTGRRVIRSRRKRGRARLAV
Specific function: Unknown
COG id: COG0230
COG function: function code J; Ribosomal protein L34
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L34P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000271 - InterPro: IPR020939 - ProDom: PD003101 [H]
Pfam domain/function: PF00468 Ribosomal_L34 [H]
EC number: NA
Molecular weight: Translated: 5398; Mature: 5266
Theoretical pI: Translated: 13.65; Mature: 13.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRTFGGTSRKRKRVSGFRVRMRNHTGRRVIRSRRKRGRARLAV CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKRTFGGTSRKRKRVSGFRVRMRNHTGRRVIRSRRKRGRARLAV CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA