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The map label for this gene is rnpA [H]

Identifier: 33863636

GI number: 33863636

Start: 1454075

End: 1454461

Strand: Direct

Name: rnpA [H]

Synonym: PMT1369

Alternate gene names: 33863636

Gene position: 1454075-1454461 (Clockwise)

Preceding gene: 33863635

Following gene: 33863637

Centisome position: 60.31

GC content: 52.71

Gene sequence:

>387_bases
ATGGTGCTGCCAGCATCAATGCGATTACGGGGAAGCCGATGTTTTGAGCACCTTCAGAAGTGGGGCTATCGCTTTTATGG
AACTTCAATGGTGCTCCGTGTCATCGAAGCAAATCCCCAACTGCTCAAAGCACCCCATCGGCACCACAACTCCACGGCAT
GCCGTTGTGCCGTTGTGATCAGCAGCAAAGTGAGTAAACGGGCCGTCATTCGCAACCGTCTGCGTCGACTTCTGCACGAT
CACCTAAGAAGCAGGCTTGAGGTTGCACCCGAGCATTGCAATCACTGGGTGCTGATCAGCCTCAAGCCAGTCGCCTCCGC
AATAGAGGCATCTCCATTGCTAGAAGAATGCGACAGATTGCTCAATCAAGCAGGTTTGTTGTCATGA

Upstream 100 bases:

>100_bases
CAGTCGCCGAAAACGTGGCCGTGCGCGTCTCGCTGTCTAATCCATAACACTGCGGGTCAATCACTCAAATCACGCCACTT
GCTCAGGAAGCCAACCTCCA

Downstream 100 bases:

>100_bases
TCACAACCTCAGAAGAGGTCTTCTATGAAGGAGGCCCCGCTCAAAGCGATCTCATCATCAACCTATTGATGGGGCTAACA
CTGATTGGCCTTCCTTTCAC

Product: ribonuclease P protein component

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5 [H]

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MVLPASMRLRGSRCFEHLQKWGYRFYGTSMVLRVIEANPQLLKAPHRHHNSTACRCAVVISSKVSKRAVIRNRLRRLLHD
HLRSRLEVAPEHCNHWVLISLKPVASAIEASPLLEECDRLLNQAGLLS

Sequences:

>Translated_128_residues
MVLPASMRLRGSRCFEHLQKWGYRFYGTSMVLRVIEANPQLLKAPHRHHNSTACRCAVVISSKVSKRAVIRNRLRRLLHD
HLRSRLEVAPEHCNHWVLISLKPVASAIEASPLLEECDRLLNQAGLLS
>Mature_128_residues
MVLPASMRLRGSRCFEHLQKWGYRFYGTSMVLRVIEANPQLLKAPHRHHNSTACRCAVVISSKVSKRAVIRNRLRRLLHD
HLRSRLEVAPEHCNHWVLISLKPVASAIEASPLLEECDRLLNQAGLLS

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100 [H]

Pfam domain/function: PF00825 Ribonuclease_P [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 14637; Mature: 14637

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPASMRLRGSRCFEHLQKWGYRFYGTSMVLRVIEANPQLLKAPHRHHNSTACRCAVVI
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
SSKVSKRAVIRNRLRRLLHDHLRSRLEVAPEHCNHWVLISLKPVASAIEASPLLEECDRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEEEHHHHHHHHCCHHHHHHHHH
LNQAGLLS
HHHCCCCC
>Mature Secondary Structure
MVLPASMRLRGSRCFEHLQKWGYRFYGTSMVLRVIEANPQLLKAPHRHHNSTACRCAVVI
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
SSKVSKRAVIRNRLRRLLHDHLRSRLEVAPEHCNHWVLISLKPVASAIEASPLLEECDRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEEEHHHHHHHHCCHHHHHHHHH
LNQAGLLS
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA