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The map label for this gene is yciC [H]

Identifier: 33863552

GI number: 33863552

Start: 1369982

End: 1371049

Strand: Direct

Name: yciC [H]

Synonym: PMT1284

Alternate gene names: 33863552

Gene position: 1369982-1371049 (Clockwise)

Preceding gene: 33863551

Following gene: 33863553

Centisome position: 56.83

GC content: 52.62

Gene sequence:

>1068_bases
ATGAACGACGCAATCGCATCCGAAGCAACCACTCAACCTGATCATGGCGAAGCGCTCGAGCAAGACCGGTGCGTACCGGT
AACAATCCTCACTGGCTTCCTAGGCGCCGGCAAAACCACCCTGCTCAATCACATCCTCAGCAATCAGAACGGAATCAAAA
CCGCCGTATTGGTGAATGAATTCGGTGAAATTGGAATCGACAACGAGCTGATCGTGACCACCGGCGATGACATGGTCGAA
CTCAGCAATGGCTGCATCTGCTGCTCGATTAATGGGGAGCTGCTTGAAGCGGTTGATCGGATTCTCGAACGTCCAGACCC
AATCGATTACCTCGTTGTAGAAACCACAGGCCTGGCAGATCCGCTACCCGTTGCCATGACCTTTCTTGGCAGTGAACTGC
GAGATCAAACCCGCTTGGATTCGATCATTACCTTGATCGACGCGGAAAACTTTAACGACCAACTCCTGGAAAGCGAAGTC
GGCAGAGCCCAGGTGATCTATGGCGACATCCTGCTGCTCAACAAAACAGATCTCGTCCCTGAAGAGCGATTAAAAGAGGT
TGAATCCAAGTTGGCAGACCTCAAACAAAATCCGCGCATCCTTCGATCAATCAAAGGGAACGTGCCCTTACCGCTACTGC
TAAGCGTGGGCCTGTTTGAAACCGATCGCGTACAACCAGCAGACCTTGCAGAGAGCCACGATCACAGTCATCACCACGAC
GATCACAGTCATCACCACGATGACCACCCTGATCACCTAGCAATCGAAGGCTTCACATCCCTATCCTTCAGCAGCGATGA
CCCTTTTGCGCTGCGGAAGTTCCAAAATTTCTTAGACAATCAACTTCCTGCAGAAGTCTTTCGTGCCAAAGGGATTCTCT
GGTTCAACGAGAGCGAACGCCGCCACATCTTTCATTTAGCCGGCAAGCGCTTCTCCATTGATGACAGCGACTGGCCCGCT
GAGCGCAAGAACCAACTGGTGTTGATTGGACGCCAACTCGATCACGACACCCTGCGACGCCAACTTCAGGCCTGCGTAGC
AAAGGACGCCGGCAAAGGGTTCAGCTGA

Upstream 100 bases:

>100_bases
GCCTGGCTGATCAAAACTCACTCAGGCGAAACTGCTGCCAGCATGGAATCAAAGAACGGCTGTGGTTCCGGCACCCTCCC
GTTCCCCTGACGGCAAGCCC

Downstream 100 bases:

>100_bases
ATCCAACCAACAGGCAAACAGATCGACAACTTCGCCCACTGCTTGCTACTCAACAGCTGCATCAATGGCATGTGCTGAAC
CCGCGCCAGGAGGAGAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNDAIASEATTQPDHGEALEQDRCVPVTILTGFLGAGKTTLLNHILSNQNGIKTAVLVNEFGEIGIDNELIVTTGDDMVE
LSNGCICCSINGELLEAVDRILERPDPIDYLVVETTGLADPLPVAMTFLGSELRDQTRLDSIITLIDAENFNDQLLESEV
GRAQVIYGDILLLNKTDLVPEERLKEVESKLADLKQNPRILRSIKGNVPLPLLLSVGLFETDRVQPADLAESHDHSHHHD
DHSHHHDDHPDHLAIEGFTSLSFSSDDPFALRKFQNFLDNQLPAEVFRAKGILWFNESERRHIFHLAGKRFSIDDSDWPA
ERKNQLVLIGRQLDHDTLRRQLQACVAKDAGKGFS

Sequences:

>Translated_355_residues
MNDAIASEATTQPDHGEALEQDRCVPVTILTGFLGAGKTTLLNHILSNQNGIKTAVLVNEFGEIGIDNELIVTTGDDMVE
LSNGCICCSINGELLEAVDRILERPDPIDYLVVETTGLADPLPVAMTFLGSELRDQTRLDSIITLIDAENFNDQLLESEV
GRAQVIYGDILLLNKTDLVPEERLKEVESKLADLKQNPRILRSIKGNVPLPLLLSVGLFETDRVQPADLAESHDHSHHHD
DHSHHHDDHPDHLAIEGFTSLSFSSDDPFALRKFQNFLDNQLPAEVFRAKGILWFNESERRHIFHLAGKRFSIDDSDWPA
ERKNQLVLIGRQLDHDTLRRQLQACVAKDAGKGFS
>Mature_355_residues
MNDAIASEATTQPDHGEALEQDRCVPVTILTGFLGAGKTTLLNHILSNQNGIKTAVLVNEFGEIGIDNELIVTTGDDMVE
LSNGCICCSINGELLEAVDRILERPDPIDYLVVETTGLADPLPVAMTFLGSELRDQTRLDSIITLIDAENFNDQLLESEV
GRAQVIYGDILLLNKTDLVPEERLKEVESKLADLKQNPRILRSIKGNVPLPLLLSVGLFETDRVQPADLAESHDHSHHHD
DHSHHHDDHPDHLAIEGFTSLSFSSDDPFALRKFQNFLDNQLPAEVFRAKGILWFNESERRHIFHLAGKRFSIDDSDWPA
ERKNQLVLIGRQLDHDTLRRQLQACVAKDAGKGFS

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=370, Percent_Identity=32.1621621621622, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI33469141, Length=370, Percent_Identity=32.1621621621622, Blast_Score=161, Evalue=7e-40,
Organism=Homo sapiens, GI148727351, Length=370, Percent_Identity=32.1621621621622, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI223941779, Length=368, Percent_Identity=32.6086956521739, Blast_Score=155, Evalue=4e-38,
Organism=Homo sapiens, GI146231952, Length=370, Percent_Identity=32.4324324324324, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI223941776, Length=357, Percent_Identity=31.6526610644258, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI119120938, Length=146, Percent_Identity=41.7808219178082, Blast_Score=112, Evalue=4e-25,
Organism=Escherichia coli, GI87082430, Length=326, Percent_Identity=33.7423312883436, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788499, Length=213, Percent_Identity=31.4553990610329, Blast_Score=91, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6324356, Length=273, Percent_Identity=28.5714285714286, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 39565; Mature: 39565

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAIASEATTQPDHGEALEQDRCVPVTILTGFLGAGKTTLLNHILSNQNGIKTAVLVNE
CCCCCCCCCCCCCCCCCHHCCCCCEEHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEHH
FGEIGIDNELIVTTGDDMVELSNGCICCSINGELLEAVDRILERPDPIDYLVVETTGLAD
HHCCCCCCCEEEECCCCCEECCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCC
PLPVAMTFLGSELRDQTRLDSIITLIDAENFNDQLLESEVGRAQVIYGDILLLNKTDLVP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEEEEEECCCCCCH
EERLKEVESKLADLKQNPRILRSIKGNVPLPLLLSVGLFETDRVQPADLAESHDHSHHHD
HHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC
DHSHHHDDHPDHLAIEGFTSLSFSSDDPFALRKFQNFLDNQLPAEVFRAKGILWFNESER
CCCCCCCCCCCCEEEECCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHCCEEEECCCCC
RHIFHLAGKRFSIDDSDWPAERKNQLVLIGRQLDHDTLRRQLQACVAKDAGKGFS
CEEEEECCCEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNDAIASEATTQPDHGEALEQDRCVPVTILTGFLGAGKTTLLNHILSNQNGIKTAVLVNE
CCCCCCCCCCCCCCCCCHHCCCCCEEHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEHH
FGEIGIDNELIVTTGDDMVELSNGCICCSINGELLEAVDRILERPDPIDYLVVETTGLAD
HHCCCCCCCEEEECCCCCEECCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCC
PLPVAMTFLGSELRDQTRLDSIITLIDAENFNDQLLESEVGRAQVIYGDILLLNKTDLVP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEEEEEECCCCCCH
EERLKEVESKLADLKQNPRILRSIKGNVPLPLLLSVGLFETDRVQPADLAESHDHSHHHD
HHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC
DHSHHHDDHPDHLAIEGFTSLSFSSDDPFALRKFQNFLDNQLPAEVFRAKGILWFNESER
CCCCCCCCCCCCEEEECCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHCCEEEECCCCC
RHIFHLAGKRFSIDDSDWPAERKNQLVLIGRQLDHDTLRRQLQACVAKDAGKGFS
CEEEEECCCEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]