| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is phhB
Identifier: 33863551
GI number: 33863551
Start: 1369601
End: 1369891
Strand: Direct
Name: phhB
Synonym: PMT1283
Alternate gene names: NA
Gene position: 1369601-1369891 (Clockwise)
Preceding gene: 33863550
Following gene: 33863552
Centisome position: 56.81
GC content: 54.3
Gene sequence:
>291_bases ATGACGGCAACCCTGCTTACTGCTGAACAGCTCTCTTCCGTAGCTGAAAAGCTGCCGGGGTGGACCCTGGCGGATCAACG GCTGCAAAGGCAATGGCGCTTTCGCAACTTTGTGGAAGCCTTCGGTTTTATGACCCGTGTGGCACTGCTAGCTGAAGCCA TGAACCATCACCCGGAATGGAGCAACGTCTATGCCACTGTGACGATCGAGTTGACGACCCATGACGTCAACGGATTGAGC GATCGTGATTTGAAGCTCGCCGAAGCAATCAATTTGCTTGAGCCTGGCTGA
Upstream 100 bases:
>100_bases GGACAACATCAAATCACCCTTCAACCATTGCATCATTCGAGCAACACAACACAGTAACCATCACAGACAAGAATGACTCC AAAGCTCACAACACAACCTC
Downstream 100 bases:
>100_bases TCAAAACTCACTCAGGCGAAACTGCTGCCAGCATGGAATCAAAGAACGGCTGTGGTTCCGGCACCCTCCCGTTCCCCTGA CGGCAAGCCCATGAACGACG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTATLLTAEQLSSVAEKLPGWTLADQRLQRQWRFRNFVEAFGFMTRVALLAEAMNHHPEWSNVYATVTIELTTHDVNGLS DRDLKLAEAINLLEPG
Sequences:
>Translated_96_residues MTATLLTAEQLSSVAEKLPGWTLADQRLQRQWRFRNFVEAFGFMTRVALLAEAMNHHPEWSNVYATVTIELTTHDVNGLS DRDLKLAEAINLLEPG >Mature_95_residues TATLLTAEQLSSVAEKLPGWTLADQRLQRQWRFRNFVEAFGFMTRVALLAEAMNHHPEWSNVYATVTIELTTHDVNGLSD RDLKLAEAINLLEPG
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI134133240, Length=76, Percent_Identity=52.6315789473684, Blast_Score=87, Evalue=3e-18, Organism=Homo sapiens, GI4557831, Length=92, Percent_Identity=47.8260869565217, Blast_Score=82, Evalue=7e-17, Organism=Caenorhabditis elegans, GI115533705, Length=84, Percent_Identity=55.952380952381, Blast_Score=95, Evalue=7e-21, Organism=Drosophila melanogaster, GI45549100, Length=80, Percent_Identity=51.25, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 10868; Mature: 10737
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLLTAEQLSSVAEKLPGWTLADQRLQRQWRFRNFVEAFGFMTRVALLAEAMNHHPEW CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SNVYATVTIELTTHDVNGLSDRDLKLAEAINLLEPG CCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TATLLTAEQLSSVAEKLPGWTLADQRLQRQWRFRNFVEAFGFMTRVALLAEAMNHHPEW CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SNVYATVTIELTTHDVNGLSDRDLKLAEAINLLEPG CCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA