| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is pyrH [H]
Identifier: 33863512
GI number: 33863512
Start: 1332133
End: 1332846
Strand: Direct
Name: pyrH [H]
Synonym: PMT1244
Alternate gene names: 33863512
Gene position: 1332133-1332846 (Clockwise)
Preceding gene: 33863511
Following gene: 33863513
Centisome position: 55.26
GC content: 54.62
Gene sequence:
>714_bases ATGGCTTACGCGCGAGTCCTTCTAAAACTCAGCGGCGAAGCGCTGATGGGTGATCAGAGTTATGGCATCGATCCAGCAAT TGTTCAATCCATCGCAGAGGATGTAGCCAAAGTGGTGGCCAAGGGCACCCAATTGGCGATCGTGGTGGGCGGTGGCAACA TTTTTCGAGGCCTAAAGGGTTCTGCCGCGGGCATGGATCGGGCCACGGCCGACTACGTCGGCATGTTGGCCACAGTGATG AATGCCATCACATTGCAGGACGGCTTAGAGCGAGCGGGGGTACCAACCCGAGTACAAACTGCAATCGAAATGCAAGAGGT GGCGGAGCCTTACATCCGTCGGCGAGCCATTCGTCATCTAGAGAAAGGCCGAGTGGTTGTGTTTGGTGGAGGCTGCGGTA ATCCATTCTTCACAACTGACACCACGGCCTCACTTCGGGCTGCGGAAATCAACGCTGATGTGGTGTTCAAAGCCACGAAG GTGGATGGGGTTTATGACCGTGATCCCAAACGCTTCCCTGATGCAACACGCTATGACTCACTCACCTTCCAGCAAGTACT AAGCGGCGAGCTGGCGGTGATGGACAGCACTGCCATTGCCCTATGCAAAGACAACAATATCCCGATCGTTGTATTTGACC TCTTTGAACCTGGCAACATCGGCAAAGCAGTGGCTGGCGAAGCAATCGGCTCCCGTATCAGCAATGCAACCTAA
Upstream 100 bases:
>100_bases CTTCATCCAAGCGAATCTGAGAATCGACAACCCTTCAGACCATCCAGCTCAAGGACGATTCGGAGAAGGCTTGCTACTCT CTTCGGGATCTGGACGATGA
Downstream 100 bases:
>100_bases ACAGGCCATCCCAACTCATCCCTTCACCCAGCCTTCGCCTCTCTGAAGCCATGTCGAACCAGGAACTCAAAGACAACATG CACAAATCAGTGGAGGCCAC
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MAYARVLLKLSGEALMGDQSYGIDPAIVQSIAEDVAKVVAKGTQLAIVVGGGNIFRGLKGSAAGMDRATADYVGMLATVM NAITLQDGLERAGVPTRVQTAIEMQEVAEPYIRRRAIRHLEKGRVVVFGGGCGNPFFTTDTTASLRAAEINADVVFKATK VDGVYDRDPKRFPDATRYDSLTFQQVLSGELAVMDSTAIALCKDNNIPIVVFDLFEPGNIGKAVAGEAIGSRISNAT
Sequences:
>Translated_237_residues MAYARVLLKLSGEALMGDQSYGIDPAIVQSIAEDVAKVVAKGTQLAIVVGGGNIFRGLKGSAAGMDRATADYVGMLATVM NAITLQDGLERAGVPTRVQTAIEMQEVAEPYIRRRAIRHLEKGRVVVFGGGCGNPFFTTDTTASLRAAEINADVVFKATK VDGVYDRDPKRFPDATRYDSLTFQQVLSGELAVMDSTAIALCKDNNIPIVVFDLFEPGNIGKAVAGEAIGSRISNAT >Mature_236_residues AYARVLLKLSGEALMGDQSYGIDPAIVQSIAEDVAKVVAKGTQLAIVVGGGNIFRGLKGSAAGMDRATADYVGMLATVMN AITLQDGLERAGVPTRVQTAIEMQEVAEPYIRRRAIRHLEKGRVVVFGGGCGNPFFTTDTTASLRAAEINADVVFKATKV DGVYDRDPKRFPDATRYDSLTFQQVLSGELAVMDSTAIALCKDNNIPIVVFDLFEPGNIGKAVAGEAIGSRISNAT
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=232, Percent_Identity=48.2758620689655, Blast_Score=229, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 25145; Mature: 25014
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYARVLLKLSGEALMGDQSYGIDPAIVQSIAEDVAKVVAKGTQLAIVVGGGNIFRGLKG CHHHHEEHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCC SAAGMDRATADYVGMLATVMNAITLQDGLERAGVPTRVQTAIEMQEVAEPYIRRRAIRHL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKGRVVVFGGGCGNPFFTTDTTASLRAAEINADVVFKATKVDGVYDRDPKRFPDATRYDS HCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCHHCC LTFQQVLSGELAVMDSTAIALCKDNNIPIVVFDLFEPGNIGKAVAGEAIGSRISNAT HHHHHHHCCCEEEECCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure AYARVLLKLSGEALMGDQSYGIDPAIVQSIAEDVAKVVAKGTQLAIVVGGGNIFRGLKG HHHHEEHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCC SAAGMDRATADYVGMLATVMNAITLQDGLERAGVPTRVQTAIEMQEVAEPYIRRRAIRHL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKGRVVVFGGGCGNPFFTTDTTASLRAAEINADVVFKATKVDGVYDRDPKRFPDATRYDS HCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCHHCC LTFQQVLSGELAVMDSTAIALCKDNNIPIVVFDLFEPGNIGKAVAGEAIGSRISNAT HHHHHHHCCCEEEECCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA