| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863432
Identifier: 33863432
GI number: 33863432
Start: 1254612
End: 1254959
Strand: Direct
Name: 33863432
Synonym: PMT1162
Alternate gene names: NA
Gene position: 1254612-1254959 (Clockwise)
Preceding gene: 161350044
Following gene: 33863437
Centisome position: 52.04
GC content: 52.59
Gene sequence:
>348_bases ATGAATTTCAAGGTGAGTCATCACCTACTTCTTTGCGCCACAGCCAACAAGGCGGCCTGTTGCAGTGCAGATGTCGGCAA CGCCAGCTGGGCCAATCTCAAAAAACAAATCAAACATCATGACCTCGAAAACATCGATCGTCCAGAAGGTGTGGTTCTGC GTAGCAAGGTTGACTGTCTTCGCATCTGCAACGACGGACCAATCCTGCTGATCTGGCCTGACGGGATCTGGTATGGCGGA GTGACACCAGAACGAATCGAATCAATCGTGAAAGAGCATGTGCTTGGCGGCCAACCAATCGAAGCCTGGATCATTCGCCG GACCCCTCAGCAGCAGAGACATCCCTGA
Upstream 100 bases:
>100_bases AGCTTGATGACGTGCTTGCCGTCGATGCATGGGCACGCAAGGCCGTACAAGAGCAGGTGAAACGGGGCACCCGTCGCCTG CCACTGCCAGCCTTGACAGC
Downstream 100 bases:
>100_bases ATTTTTACTGGGTTTTTAGTCAAGCTCCAAACTTTGACAGCCAACGGGCCACCACCTGATCCCCCCAGCAGCCTCCGATG GCATGGAAACCATTGTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Ferredoxin-Like Protein; Ferredoxin 2Fe-2S; Ferredoxin Like Protein; Ferredoxin-Like; Sucraseferredoxin Family Protein; Ferredoxin 2fe-2s; Ferredoxin 2Fe-2S Protein
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MNFKVSHHLLLCATANKAACCSADVGNASWANLKKQIKHHDLENIDRPEGVVLRSKVDCLRICNDGPILLIWPDGIWYGG VTPERIESIVKEHVLGGQPIEAWIIRRTPQQQRHP
Sequences:
>Translated_115_residues MNFKVSHHLLLCATANKAACCSADVGNASWANLKKQIKHHDLENIDRPEGVVLRSKVDCLRICNDGPILLIWPDGIWYGG VTPERIESIVKEHVLGGQPIEAWIIRRTPQQQRHP >Mature_115_residues MNFKVSHHLLLCATANKAACCSADVGNASWANLKKQIKHHDLENIDRPEGVVLRSKVDCLRICNDGPILLIWPDGIWYGG VTPERIESIVKEHVLGGQPIEAWIIRRTPQQQRHP
Specific function: Unknown
COG id: COG3411
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12937; Mature: 12937
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKVSHHLLLCATANKAACCSADVGNASWANLKKQIKHHDLENIDRPEGVVLRSKVDCL CCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEE RICNDGPILLIWPDGIWYGGVTPERIESIVKEHVLGGQPIEAWIIRRTPQQQRHP EECCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHCCCC >Mature Secondary Structure MNFKVSHHLLLCATANKAACCSADVGNASWANLKKQIKHHDLENIDRPEGVVLRSKVDCL CCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEE RICNDGPILLIWPDGIWYGGVTPERIESIVKEHVLGGQPIEAWIIRRTPQQQRHP EECCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA