| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863404
Identifier: 33863404
GI number: 33863404
Start: 1224093
End: 1225253
Strand: Direct
Name: 33863404
Synonym: PMT1133
Alternate gene names: NA
Gene position: 1224093-1225253 (Clockwise)
Preceding gene: 33863403
Following gene: 33863405
Centisome position: 50.77
GC content: 55.38
Gene sequence:
>1161_bases TTGTCAAGCAGTCGCCCTTACCGCAACCGCTCAAACGGGGCTGGACCCCTACGGCTTTTGTTGCGTCTGATCTTGATGGG CATCGGCCTCGGCGTGATTACAGGTTCAGCGCTCAAGATGCTCGGCCCACAGGTGAAGCAGGGCAAACTGGACTTGCCGG AGTGGCTTCCTGGGCGAAATTGGATTTCCCTGAAGGGCCTCCCCAGTCGCTTCAACATCGTTGAGGAAGCCACAAACCCC ATGCTCAGCAATGGGAATAGTTTGCAACTAGGCAATTTCCAGACGAAGCAAGAACTCACAACGTTGAGCAACCGCTGGAG AGAACTGGCCAAGCAACAAAAAGACTTACAAGCAAGCGCATTCTTGCTAGTGCTTGATGATGGACGCTATGCCGAGCTCT CCGCCGAGACAGCACTGCCTGCTGCTAGCTCAATCAAAACAGCAATCCTGCTGGTAGCTCTCGAACTCATCGATTCCGGT CAGCTCAGCTGGAATGAACCCCTGAAGCTCACGAAAGAGATTATTGGTGGTGGTGCTGGCTGGATGGCCAGCAAGCCGCT TGGCAGCCAATTCCCTGCCCACGAAGTTGCCACCGAGATGATTCGGGTGAGCGATAACACCGCCACCAATCTGCTGATTC AACGCATTGGTGGCAAGGACGTCCTCAATGCACGCTTCAATGCTCTCGGCCTGAGCTCCACGGTGGTGAATAACTGGTTG CCGGATCTACAAGGCACCAATACCACCAGCAGCCACGATCTGGCACGGGCCATCGCACTTGTCGATACTGGGAAAGCCCT TAGCCCACGCACACGGGATCTATTCAGGGAGGCAATGAGCACCTCCGTCAGCAACCGCCTATTACCTGGTGGATTTCTTA AGGGACTGGGCGGCAAGCAAGGAGAGCCTGACAACAGCCTCCTGGCAAAGGGCTACCGCATCTACAACAAAACCGGCGAC ATCGGCATCGCTTATGCGGATGCTGGCCTAATCGAACTACCTGATGGCAGTCGTGCAGTGGCAGGGTTCATGGTGAAAGG CCCCTTCAACGACCCCCGCTCCACAGAACTAATCCGCGACATGGCAGCCGCTATGGCTCCAGTACTCAAGCCAAAGCCAT CGACACCTCGAACGGAATCAACAAACAGCAATCAGCCATGA
Upstream 100 bases:
>100_bases CGAGGAAGTAGCCCTGCTGAGAGGGATGGTGAGGCAACTTCGCTGGGCCATCCATTCTCGTCACTCTTAACCTCAGCCGA ACTCACTGATCTTCACTTCC
Downstream 100 bases:
>100_bases AGATTCCCGCCCTTTTGTCAGTTGCGCTTTTCAACTTATCCGGAGCAGTGCTTGACACCCCCGCTCTGATTGCTGCCCCA ACCGTCAAACAAAGACAGCA
Product: beta-lactamase
Products: substituted beta-amino acid
Alternate protein names: Beta-Lactamase Family Protein; Beta-Lactamase Class A; Carboxylesterase; Beta-Lactamase Protein; Beta-Lactamase Class A-Like Protein; Carboxylesterase Beta-Lactamase Family Protein
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSSSRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRNWISLKGLPSRFNIVEEATNP MLSNGNSLQLGNFQTKQELTTLSNRWRELAKQQKDLQASAFLLVLDDGRYAELSAETALPAASSIKTAILLVALELIDSG QLSWNEPLKLTKEIIGGGAGWMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWL PDLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQGEPDNSLLAKGYRIYNKTGD IGIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRDMAAAMAPVLKPKPSTPRTESTNSNQP
Sequences:
>Translated_386_residues MSSSRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRNWISLKGLPSRFNIVEEATNP MLSNGNSLQLGNFQTKQELTTLSNRWRELAKQQKDLQASAFLLVLDDGRYAELSAETALPAASSIKTAILLVALELIDSG QLSWNEPLKLTKEIIGGGAGWMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWL PDLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQGEPDNSLLAKGYRIYNKTGD IGIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRDMAAAMAPVLKPKPSTPRTESTNSNQP >Mature_385_residues SSSRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRNWISLKGLPSRFNIVEEATNPM LSNGNSLQLGNFQTKQELTTLSNRWRELAKQQKDLQASAFLLVLDDGRYAELSAETALPAASSIKTAILLVALELIDSGQ LSWNEPLKLTKEIIGGGAGWMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWLP DLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQGEPDNSLLAKGYRIYNKTGDI GIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRDMAAAMAPVLKPKPSTPRTESTNSNQP
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6
Molecular weight: Translated: 41480; Mature: 41349
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC WISLKGLPSRFNIVEEATNPMLSNGNSLQLGNFQTKQELTTLSNRWRELAKQQKDLQASA EEEECCCCHHHHHHHHHCCCHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEE FLLVLDDGRYAELSAETALPAASSIKTAILLVALELIDSGQLSWNEPLKLTKEIIGGGAG EEEEECCCCEEECCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC WMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCC PDLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQ CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC GEPDNSLLAKGYRIYNKTGDIGIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRD CCCCHHHHHCCEEEEECCCCEEEEEECCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHH MAAAMAPVLKPKPSTPRTESTNSNQP HHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSSRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC WISLKGLPSRFNIVEEATNPMLSNGNSLQLGNFQTKQELTTLSNRWRELAKQQKDLQASA EEEECCCCHHHHHHHHHCCCHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEE FLLVLDDGRYAELSAETALPAASSIKTAILLVALELIDSGQLSWNEPLKLTKEIIGGGAG EEEEECCCCEEECCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC WMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCC PDLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQ CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC GEPDNSLLAKGYRIYNKTGDIGIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRD CCCCHHHHHCCEEEEECCCCEEEEEECCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHH MAAAMAPVLKPKPSTPRTESTNSNQP HHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA