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The map label for this gene is yfhQ [C]

Identifier: 33863403

GI number: 33863403

Start: 1223313

End: 1224062

Strand: Direct

Name: yfhQ [C]

Synonym: PMT1132

Alternate gene names: 33863403

Gene position: 1223313-1224062 (Clockwise)

Preceding gene: 33863402

Following gene: 33863404

Centisome position: 50.74

GC content: 56.0

Gene sequence:

>750_bases
TTGAACAAGGACATCCGCTCAATCCAAACGACTGTTGTTCTGGTTGAGCCAATTGGTCCACTGAATCTGGGCAGTGTGGC
CAGACTCTGCGCCAACTTCGGAGTACAAGAACTACGCCTGGTCTCGCCCCGCTGCGACCCTGCTGATCCCGAGGCAAGAC
GCATGGCTGTCCATGGCGTAGCAATGCTTAAGCAGGCAAAACAATTCTCATGCTTGCTCGATGCCGTAGCTGACTGTCAC
AGAGTTGTAGCCAGCTGCGGCCGATTGGATCATGGCAACATCCCCCTGCAAACCCCCGAACAAGCAGTGCCATGGTTACT
AGAGAGCATGAGTGCAGCACCTGTGGCACTGGTATTTGGCCGTGAAGACAGGGGCCTAACCAACGAGGAACTTCAACTCG
CCCAACGTGTACTCACTCTGCACAGCTCCCACGGATATCCATCCCTCAACCTCTCGCATGCAGTAGCGATCGTGCTGCAT
GAGCTACAACGTTGCCAAGGGCAAGGAACGCTCAGGGAAGGGCAATCGGCATGGCCGGACCCAGCATCACCTCGTCAACT
CGACGCATGCTTAACAGACGCACAGGATCTCCTGTTAGAGGTGGGATTTCTTTTGAGCCATACGGCCCAAGCCCGCATGG
CCAAAGTCCGTGGTTTACTTCAACGCGCTGCCGTCCGTCCCGAGGAAGTAGCCCTGCTGAGAGGGATGGTGAGGCAACTT
CGCTGGGCCATCCATTCTCGTCACTCTTAA

Upstream 100 bases:

>100_bases
TGATCAGGCAAGTGGTAAGCGGCAATACGCCGCCCATGCCCAGGTTCCAGCTTGAGCCTCAAGAAATGGCCGACCTACTG
GCTTATTTAAATTCCCTGAA

Downstream 100 bases:

>100_bases
CCTCAGCCGAACTCACTGATCTTCACTTCCTTGTCAAGCAGTCGCCCTTACCGCAACCGCTCAAACGGGGCTGGACCCCT
ACGGCTTTTGTTGCGTCTGA

Product: tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNKDIRSIQTTVVLVEPIGPLNLGSVARLCANFGVQELRLVSPRCDPADPEARRMAVHGVAMLKQAKQFSCLLDAVADCH
RVVASCGRLDHGNIPLQTPEQAVPWLLESMSAAPVALVFGREDRGLTNEELQLAQRVLTLHSSHGYPSLNLSHAVAIVLH
ELQRCQGQGTLREGQSAWPDPASPRQLDACLTDAQDLLLEVGFLLSHTAQARMAKVRGLLQRAAVRPEEVALLRGMVRQL
RWAIHSRHS

Sequences:

>Translated_249_residues
MNKDIRSIQTTVVLVEPIGPLNLGSVARLCANFGVQELRLVSPRCDPADPEARRMAVHGVAMLKQAKQFSCLLDAVADCH
RVVASCGRLDHGNIPLQTPEQAVPWLLESMSAAPVALVFGREDRGLTNEELQLAQRVLTLHSSHGYPSLNLSHAVAIVLH
ELQRCQGQGTLREGQSAWPDPASPRQLDACLTDAQDLLLEVGFLLSHTAQARMAKVRGLLQRAAVRPEEVALLRGMVRQL
RWAIHSRHS
>Mature_249_residues
MNKDIRSIQTTVVLVEPIGPLNLGSVARLCANFGVQELRLVSPRCDPADPEARRMAVHGVAMLKQAKQFSCLLDAVADCH
RVVASCGRLDHGNIPLQTPEQAVPWLLESMSAAPVALVFGREDRGLTNEELQLAQRVLTLHSSHGYPSLNLSHAVAIVLH
ELQRCQGQGTLREGQSAWPDPASPRQLDACLTDAQDLLLEVGFLLSHTAQARMAKVRGLLQRAAVRPEEVALLRGMVRQL
RWAIHSRHS

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=230, Percent_Identity=32.1739130434783, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1790865, Length=156, Percent_Identity=35.2564102564103, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27307; Mature: 27307

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDIRSIQTTVVLVEPIGPLNLGSVARLCANFGVQELRLVSPRCDPADPEARRMAVHGV
CCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHH
AMLKQAKQFSCLLDAVADCHRVVASCGRLDHGNIPLQTPEQAVPWLLESMSAAPVALVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC
REDRGLTNEELQLAQRVLTLHSSHGYPSLNLSHAVAIVLHELQRCQGQGTLREGQSAWPD
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC
PASPRQLDACLTDAQDLLLEVGFLLSHTAQARMAKVRGLLQRAAVRPEEVALLRGMVRQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RWAIHSRHS
HHHHHHCCC
>Mature Secondary Structure
MNKDIRSIQTTVVLVEPIGPLNLGSVARLCANFGVQELRLVSPRCDPADPEARRMAVHGV
CCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHH
AMLKQAKQFSCLLDAVADCHRVVASCGRLDHGNIPLQTPEQAVPWLLESMSAAPVALVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC
REDRGLTNEELQLAQRVLTLHSSHGYPSLNLSHAVAIVLHELQRCQGQGTLREGQSAWPD
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC
PASPRQLDACLTDAQDLLLEVGFLLSHTAQARMAKVRGLLQRAAVRPEEVALLRGMVRQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RWAIHSRHS
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]