Click here to switch to the map view.

The map label for this gene is lip3 [H]

Identifier: 33863334

GI number: 33863334

Start: 1147540

End: 1148439

Strand: Direct

Name: lip3 [H]

Synonym: PMT1063

Alternate gene names: 33863334

Gene position: 1147540-1148439 (Clockwise)

Preceding gene: 33863333

Following gene: 33863335

Centisome position: 47.6

GC content: 54.22

Gene sequence:

>900_bases
ATGGCAGCCCAAACAATCGCCTCGTCAGAGACCCTTTTACGTCAGCTCACACCACAACTTCTGGATCCATTAGCCCGTGA
CCTGGCCAATCAAGTTCAGTGGTGGTCTTTACCGGGGCTTGTCCCATGCTCGACCTCAGAGCCTGAGTCCTACCCAGTAG
CCATTACTGGCGAGGGGGCTCCAGTGCTTCTGCTGCATGGGTTTGATAGCAGCTTCCTTGAATTCCGACGCCTAGCTCCG
TTATTAAGCCCTCACCATCAGCTTGTGATTCCGGATTTGTATGGTTTTGGCTTCACTCCCCGTCCCCCTGCCGCTGACTA
TGGACAAGAGGCGCTCATCCGTCACCTCGATGAACTGCTAGCCCATCTGCCCTCTAATTCTCCAGTGGGAGTCATCGGAG
CATCAATGGGAGGTGCTATTGCCATGGAGCTTGCTAGACGTCATCCAAAACAAATCAACCGCTTGCTCTTACTTTCGCCT
GCAGGATTAACAGGACGGCCAAAACCTATCCCTCCAGGCCTAGATCAACTGGGCGCATGGATCCTTAGTCAACCGGCCGT
GCGACGCAGCATCTGCCGCCAAGCCTTCGCTGATCCCAAAAACTCTGTCGGAGATGCTGAGGAACAAATCGCTTCCCTTC
ATCTACAGGTATCAGGCTGGAGGAGATCACTAGCTGCCTTTGCCCGCAGTGGAGGGATCGCCAATTGCGGAACACCGCTA
CCCCAGCAACCACTTCATGTGATCTGGGGTGCCAACGACCGTATTTTAAATGGACCTCAGAGACGGGAAGCCCTCACCCT
GCTGGGATCTCAAGTGGAAGAACTTGACAACTGCGGCCATTTACCACATCTCGACCATCCCAAGATTGTCGCCCAATGCT
GGCTTCAAGCTTTGTCCTAG

Upstream 100 bases:

>100_bases
CCCTACTCGAAGCACTCCTCGGCGCTAGCGACAATGGCCCGGTCCCAGTCGAATCCACAGTCACCAAGCGAATAGCAGCC
TCTTGAACCTCAAAACTGGA

Downstream 100 bases:

>100_bases
CCATGGGAGATCCTTCATCCACCACCACCAGTACCGGCCCTTTATTGCAACTCCTCGCCAATGGTCTAAAGATTTGGGTC
CGCCGACAATGCGATGCCGT

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: Triacylglycerol lipase [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MAAQTIASSETLLRQLTPQLLDPLARDLANQVQWWSLPGLVPCSTSEPESYPVAITGEGAPVLLLHGFDSSFLEFRRLAP
LLSPHHQLVIPDLYGFGFTPRPPAADYGQEALIRHLDELLAHLPSNSPVGVIGASMGGAIAMELARRHPKQINRLLLLSP
AGLTGRPKPIPPGLDQLGAWILSQPAVRRSICRQAFADPKNSVGDAEEQIASLHLQVSGWRRSLAAFARSGGIANCGTPL
PQQPLHVIWGANDRILNGPQRREALTLLGSQVEELDNCGHLPHLDHPKIVAQCWLQALS

Sequences:

>Translated_299_residues
MAAQTIASSETLLRQLTPQLLDPLARDLANQVQWWSLPGLVPCSTSEPESYPVAITGEGAPVLLLHGFDSSFLEFRRLAP
LLSPHHQLVIPDLYGFGFTPRPPAADYGQEALIRHLDELLAHLPSNSPVGVIGASMGGAIAMELARRHPKQINRLLLLSP
AGLTGRPKPIPPGLDQLGAWILSQPAVRRSICRQAFADPKNSVGDAEEQIASLHLQVSGWRRSLAAFARSGGIANCGTPL
PQQPLHVIWGANDRILNGPQRREALTLLGSQVEELDNCGHLPHLDHPKIVAQCWLQALS
>Mature_298_residues
AAQTIASSETLLRQLTPQLLDPLARDLANQVQWWSLPGLVPCSTSEPESYPVAITGEGAPVLLLHGFDSSFLEFRRLAPL
LSPHHQLVIPDLYGFGFTPRPPAADYGQEALIRHLDELLAHLPSNSPVGVIGASMGGAIAMELARRHPKQINRLLLLSPA
GLTGRPKPIPPGLDQLGAWILSQPAVRRSICRQAFADPKNSVGDAEEQIASLHLQVSGWRRSLAAFARSGGIANCGTPLP
QQPLHVIWGANDRILNGPQRREALTLLGSQVEELDNCGHLPHLDHPKIVAQCWLQALS

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.3 [H]

Molecular weight: Translated: 32367; Mature: 32235

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQTIASSETLLRQLTPQLLDPLARDLANQVQWWSLPGLVPCSTSEPESYPVAITGEGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCC
PVLLLHGFDSSFLEFRRLAPLLSPHHQLVIPDLYGFGFTPRPPAADYGQEALIRHLDELL
CEEEEECCCHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
AHLPSNSPVGVIGASMGGAIAMELARRHPKQINRLLLLSPAGLTGRPKPIPPGLDQLGAW
HHCCCCCCCEEEECCCCHHHHHHHHHHCHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHH
ILSQPAVRRSICRQAFADPKNSVGDAEEQIASLHLQVSGWRRSLAAFARSGGIANCGTPL
HHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PQQPLHVIWGANDRILNGPQRREALTLLGSQVEELDNCGHLPHLDHPKIVAQCWLQALS
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
AAQTIASSETLLRQLTPQLLDPLARDLANQVQWWSLPGLVPCSTSEPESYPVAITGEGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCC
PVLLLHGFDSSFLEFRRLAPLLSPHHQLVIPDLYGFGFTPRPPAADYGQEALIRHLDELL
CEEEEECCCHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
AHLPSNSPVGVIGASMGGAIAMELARRHPKQINRLLLLSPAGLTGRPKPIPPGLDQLGAW
HHCCCCCCCEEEECCCCHHHHHHHHHHCHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHH
ILSQPAVRRSICRQAFADPKNSVGDAEEQIASLHLQVSGWRRSLAAFARSGGIANCGTPL
HHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PQQPLHVIWGANDRILNGPQRREALTLLGSQVEELDNCGHLPHLDHPKIVAQCWLQALS
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2001407 [H]