| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863335
Identifier: 33863335
GI number: 33863335
Start: 1148442
End: 1149086
Strand: Direct
Name: 33863335
Synonym: PMT1064
Alternate gene names: NA
Gene position: 1148442-1149086 (Clockwise)
Preceding gene: 33863334
Following gene: 33863338
Centisome position: 47.64
GC content: 51.01
Gene sequence:
>645_bases ATGGGAGATCCTTCATCCACCACCACCAGTACCGGCCCTTTATTGCAACTCCTCGCCAATGGTCTAAAGATTTGGGTCCG CCGACAATGCGATGCCGTTGGTGAACTGAAGCTGGAACTGCACGGATCTGCTCTGGAGCTCTTTAGAGGTCGTCTTTCAG GAGTCAGTCTCATGGCCAAGGAGGTGATCTTTCAAGGCCTGCCATTGCATTACGCCGAATTAAAAAGCGGCCCCCTCAGG CTGAACATGAACCTCGGCAAATCAGCCCAGGCTGTGACTCTCGAGCAAAGCTTCGATCTTCAGGGAACTGTATCAATCAC GGACAAAGACCTCAATCAGGTCCTGCTATCAGATCCATGGAGATGGCTTGGCGATTGGCTAGCAGAAGAGCTCATTGGCA TAACGCCTCTTGGAGGACTTCAAATCAACAACGACACCTTGGAATTACAGGCTCCAGTGATTGGTCAACAAGAACCGGCA AGGCGACGTTTTCTAATCAGAGCGGATCAAGGAACCGTGCTGATTAGACACCAGGATGTGGATTTAGAAGCTTCACTACC CATGGACCCTGCTATTCACATTGAAGAAGCCGTTCTGAACGGTGGACAACTTCACCTCAAGGGTCGCGCATCAGTAACAC CCTGA
Upstream 100 bases:
>100_bases TGGGATCTCAAGTGGAAGAACTTGACAACTGCGGCCATTTACCACATCTCGACCATCCCAAGATTGTCGCCCAATGCTGG CTTCAAGCTTTGTCCTAGCC
Downstream 100 bases:
>100_bases TCGCATTAACTCATGACAGGCAGGATCAGCGTTACTGCGTAATACACCACTGCAGGAGTGAAGAGATAGCTATCAATGCG ATCAAGGATGCCGCCATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MGDPSSTTTSTGPLLQLLANGLKIWVRRQCDAVGELKLELHGSALELFRGRLSGVSLMAKEVIFQGLPLHYAELKSGPLR LNMNLGKSAQAVTLEQSFDLQGTVSITDKDLNQVLLSDPWRWLGDWLAEELIGITPLGGLQINNDTLELQAPVIGQQEPA RRRFLIRADQGTVLIRHQDVDLEASLPMDPAIHIEEAVLNGGQLHLKGRASVTP
Sequences:
>Translated_214_residues MGDPSSTTTSTGPLLQLLANGLKIWVRRQCDAVGELKLELHGSALELFRGRLSGVSLMAKEVIFQGLPLHYAELKSGPLR LNMNLGKSAQAVTLEQSFDLQGTVSITDKDLNQVLLSDPWRWLGDWLAEELIGITPLGGLQINNDTLELQAPVIGQQEPA RRRFLIRADQGTVLIRHQDVDLEASLPMDPAIHIEEAVLNGGQLHLKGRASVTP >Mature_213_residues GDPSSTTTSTGPLLQLLANGLKIWVRRQCDAVGELKLELHGSALELFRGRLSGVSLMAKEVIFQGLPLHYAELKSGPLRL NMNLGKSAQAVTLEQSFDLQGTVSITDKDLNQVLLSDPWRWLGDWLAEELIGITPLGGLQINNDTLELQAPVIGQQEPAR RRFLIRADQGTVLIRHQDVDLEASLPMDPAIHIEEAVLNGGQLHLKGRASVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23393; Mature: 23262
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDPSSTTTSTGPLLQLLANGLKIWVRRQCDAVGELKLELHGSALELFRGRLSGVSLMAK CCCCCCCCCCCHHHHHHHHHHHHEEHHHHCCCCCEEEEEECCHHHHHHHHHHCCHHHHHH EVIFQGLPLHYAELKSGPLRLNMNLGKSAQAVTLEQSFDLQGTVSITDKDLNQVLLSDPW HHHHCCCCCCHHHCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHCCCH RWLGDWLAEELIGITPLGGLQINNDTLELQAPVIGQQEPARRRFLIRADQGTVLIRHQDV HHHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCC DLEASLPMDPAIHIEEAVLNGGQLHLKGRASVTP CEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure GDPSSTTTSTGPLLQLLANGLKIWVRRQCDAVGELKLELHGSALELFRGRLSGVSLMAK CCCCCCCCCCHHHHHHHHHHHHEEHHHHCCCCCEEEEEECCHHHHHHHHHHCCHHHHHH EVIFQGLPLHYAELKSGPLRLNMNLGKSAQAVTLEQSFDLQGTVSITDKDLNQVLLSDPW HHHHCCCCCCHHHCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHCCCH RWLGDWLAEELIGITPLGGLQINNDTLELQAPVIGQQEPARRRFLIRADQGTVLIRHQDV HHHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCC DLEASLPMDPAIHIEEAVLNGGQLHLKGRASVTP CEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA