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The map label for this gene is 33863273

Identifier: 33863273

GI number: 33863273

Start: 1079654

End: 1080337

Strand: Direct

Name: 33863273

Synonym: PMT1002

Alternate gene names: NA

Gene position: 1079654-1080337 (Clockwise)

Preceding gene: 33863272

Following gene: 33863274

Centisome position: 44.78

GC content: 49.56

Gene sequence:

>684_bases
ATGGCCGATAAGTCAGCGAAATGGATCACAGCCCTGCGCGACAGGATCAGACGACAATGTGGCGATGGCTGGATGGTTCG
CGGCGTTGGTGACGGTCTTCTACAGAGGGTTCAACTGACTGTGCGCTTCGACGATGGCACCCGCACCAGCATCATCCTCG
GTCCAAAGGCCAAGACCGATCCTGATTTCGTTCCATGGGTCGCAACAAGCGCTGATTGGATCTTGAAAATTTCAACTGAG
ATCTCTGAGTTAATGAAAGATCAGGGCAAAGGATTGACTGATGCCTACGAGTTGGTGAAACAAAGAAACGAGTCTGGAGC
TGATGGTGAATTCGATTGGAAACGACTACTAAAAAAATTCAAATCACATAAAACAAGTAAAAGCAAAAATGGAGCTCGGG
TTTGGAACCGTAACTACCGCACTCCCCTTGCCCGTACAGTCGTTATTCTCACAAGTCAGCCTGAACCCAGCTCCGGCTAC
ACGCTCTTGAAAGCATTGATCGAACGTCATGGAGGAGAGCCCGGCTCCACAAGCAGAAGACTTCGCATTCAGTACGCAGC
AGAATTCCTTCGCTTCGCGTTTAAACATGGCGCCAACAGGCGTTGGCTACCACCGGAAGATCTCAAGACGTTGATCGGCG
AAAAAAATGTCGATTTCACTCAGAACAACGTCAACACTGTGTAG

Upstream 100 bases:

>100_bases
CAGCAGACCAAAGCAAAAGCCCCAGCCGCTTGAGGATGCAGCCGCAACACTGTTGAATTGACAAGAACAATCAAACAGCT
TGCGGTGCAACAGGATCCCA

Downstream 100 bases:

>100_bases
GGGTGTAGGAAACCAAGCCGCTTCGCCACATTCCAGCTGACAGACAACCCGCTAGTCCACCTTCAGGTCTCGCCTTGATC
AGCGCCTGCTTGAAGCTCTA

Product: BRCA1 C-terminus domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MADKSAKWITALRDRIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKTDPDFVPWVATSADWILKISTE
ISELMKDQGKGLTDAYELVKQRNESGADGEFDWKRLLKKFKSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGY
TLLKALIERHGGEPGSTSRRLRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKNVDFTQNNVNTV

Sequences:

>Translated_227_residues
MADKSAKWITALRDRIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKTDPDFVPWVATSADWILKISTE
ISELMKDQGKGLTDAYELVKQRNESGADGEFDWKRLLKKFKSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGY
TLLKALIERHGGEPGSTSRRLRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKNVDFTQNNVNTV
>Mature_226_residues
ADKSAKWITALRDRIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKTDPDFVPWVATSADWILKISTEI
SELMKDQGKGLTDAYELVKQRNESGADGEFDWKRLLKKFKSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGYT
LLKALIERHGGEPGSTSRRLRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKNVDFTQNNVNTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25789; Mature: 25658

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKSAKWITALRDRIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKTD
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHEEEEEEECCCCCEEEEECCCCCCC
PDFVPWVATSADWILKISTEISELMKDQGKGLTDAYELVKQRNESGADGEFDWKRLLKKF
CCCCCEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
KSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGYTLLKALIERHGGEPGSTSRR
HHHCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHH
LRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKNVDFTQNNVNTV
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADKSAKWITALRDRIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKTD
CCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHEEEEEEECCCCCEEEEECCCCCCC
PDFVPWVATSADWILKISTEISELMKDQGKGLTDAYELVKQRNESGADGEFDWKRLLKKF
CCCCCEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
KSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGYTLLKALIERHGGEPGSTSRR
HHHCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHH
LRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKNVDFTQNNVNTV
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA