Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33863274

Identifier: 33863274

GI number: 33863274

Start: 1080468

End: 1081937

Strand: Direct

Name: 33863274

Synonym: PMT1003

Alternate gene names: NA

Gene position: 1080468-1081937 (Clockwise)

Preceding gene: 33863273

Following gene: 33863275

Centisome position: 44.82

GC content: 53.27

Gene sequence:

>1470_bases
ATGCCCACGCAAAGCTTGCCTCCGATCGCTGGCTACGAAGCCGAAATTCTTGCCCTCGTTCAACAAGCTAATCCCGCTGT
GCTCACGCATAGCAATCTCAATCTGGAGCAGTTTCAGTCAGCCTTTGCCTGTGCTCTCCACATGCATCAGCCCACGATTC
CGGCAGGTGCGAATGGAGAACTGATCTCGCATCTGCAATACATGCTGGAGCACAGCGAAGAAGGCGATAACCACAACGCC
GAACCCTTTGCCCATTGCTACAAGCGCCTCGCAGACATCATTCCCCAACTGATTGAAGAGGGATGCAACCCTCGCATCAT
GCTGGATTACTCAGGCAACTTGCTCTGGGGTGTTGAGCAAATGGGCCGTGTCGACATTCTCGAGGCGCTTAAACGTCTGG
CATGCGATCCCACGCTTCAACCCCATGTGGAATGGCTCGGCACCTTTTGGAGCCATGCCGTTGCACCCTCCACTCCTATT
CCAGATCTGAAGCTACAAATCCTGGCCTGGCAGCATCAATTCGCTGCCATGTTTGGGCGGCAAGCATTGCAACGAGTGAA
GGGTTTCTCGCCACCGGAAATGCACCTTCCCAACCATCCAGACACCCTCTATGAATTGGTGAAAGCCCTCAGAGATTGCG
GATACCGTTGGCTGCTTGTTCAAGAAAACAGCGTTGAAAACTTCGATGGCTCATGCCTTCGCCATGCACAGAAATACGGC
CCCAATCAACTTGTGGCTCGTAACTCCAGAGGGGAAACAGTCAGCATTGTGGCGTTGATCAAAACCCAGGGCTCAGACAC
CAAATTGGTAGGACAGATGCAGCCCTATCACGAAGCATTAGGCCTGGGCAGACAATCACTGGCAGGCAAATCGATTCCAT
CATTGGTCTCTCAAATTGCCGACGGAGAAAATGGAGGCGTGATGATGAATGAGTTTCCAGCCGCCTTTATCCAAGCCCAT
CAAACCGTTGCTTCCCAGGTTGATCCTCTAAGCACAGTTGCGCTCAACGGCACTGAGTATCTGGAGTTGCTGGAGGCCGC
CGGTGTGGAAGCCTCTGATTGCCCGAAGATACAGGCGATACAGCAACACAAGCTGTGGCATAACACTGACAGCCCCATCA
ACCCCGAATCAATCGAAGCGGCCATCAGCGACCTCAAAGAAACAGACCCCTCCTTCTCGATGGACGGCGCATCCTGGACC
AACAATCTCAGCTGGATCAAGGGCTATGAAAATGTGCTGGAACCGATCTACAGCCTCAGCGCCAAGTTTCACCAGCTGTT
TGATCCCTTGGTGGCAAAGGATGCAACGATCACGCACACCCCCCACTATCAAGAAGCTCTGCTCTACCTGCTACTGCTAG
AAACCAGTTGCTTCCGCTATTGGGGCCAAGGCACCTGGACCAACTACGCCAATGAGATCCACCGGCGCGGAGAAGCCATG
ATCAACTCAGCAAACCAAGCACTTAGATAG

Upstream 100 bases:

>100_bases
TTCCAGCTGACAGACAACCCGCTAGTCCACCTTCAGGTCTCGCCTTGATCAGCGCCTGCTTGAAGCTCTACCAGGCCCGT
ACTACCGCAAACAAAAGTTG

Downstream 100 bases:

>100_bases
GTGTTCGTCTAAACAACAAGGCAAAAGCAAAGCCTTCAACTTTGCAGTCAATCCCAAAGCGATCGCAAACATCAATAATC
GGCATCGTTCCTAGAGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MPTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGELISHLQYMLEHSEEGDNHNA
EPFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQMGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPI
PDLKLQILAWQHQFAAMFGRQALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG
PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIADGENGGVMMNEFPAAFIQAH
QTVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAIQQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWT
NNLSWIKGYENVLEPIYSLSAKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAM
INSANQALR

Sequences:

>Translated_489_residues
MPTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGELISHLQYMLEHSEEGDNHNA
EPFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQMGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPI
PDLKLQILAWQHQFAAMFGRQALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG
PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIADGENGGVMMNEFPAAFIQAH
QTVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAIQQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWT
NNLSWIKGYENVLEPIYSLSAKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAM
INSANQALR
>Mature_488_residues
PTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGELISHLQYMLEHSEEGDNHNAE
PFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQMGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPIP
DLKLQILAWQHQFAAMFGRQALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYGP
NQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIADGENGGVMMNEFPAAFIQAHQ
TVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAIQQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWTN
NLSWIKGYENVLEPIYSLSAKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAMI
NSANQALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54368; Mature: 54237

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGE
CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
LISHLQYMLEHSEEGDNHNAEPFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQ
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECHHH
MGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPIPDLKLQILAWQHQFAAMFGR
HCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHH
QALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCC
PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIA
CCCEEEECCCCCEEEEEEEEECCCCCCEECCCCCHHHHHHCCCHHHHCCCHHHHHHHHHH
DGENGGVMMNEFPAAFIQAHQTVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAI
CCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHCCCCCCCCCHHHHH
QQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWTNNLSWIKGYENVLEPIYSLS
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAM
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
INSANQALR
HHHHHHHCC
>Mature Secondary Structure 
PTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGE
CCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
LISHLQYMLEHSEEGDNHNAEPFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQ
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECHHH
MGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPIPDLKLQILAWQHQFAAMFGR
HCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHH
QALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCC
PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIA
CCCEEEECCCCCEEEEEEEEECCCCCCEECCCCCHHHHHHCCCHHHHCCCHHHHHHHHHH
DGENGGVMMNEFPAAFIQAHQTVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAI
CCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHCCCCCCCCCHHHHH
QQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWTNNLSWIKGYENVLEPIYSLS
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAM
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
INSANQALR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA