| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863274
Identifier: 33863274
GI number: 33863274
Start: 1080468
End: 1081937
Strand: Direct
Name: 33863274
Synonym: PMT1003
Alternate gene names: NA
Gene position: 1080468-1081937 (Clockwise)
Preceding gene: 33863273
Following gene: 33863275
Centisome position: 44.82
GC content: 53.27
Gene sequence:
>1470_bases ATGCCCACGCAAAGCTTGCCTCCGATCGCTGGCTACGAAGCCGAAATTCTTGCCCTCGTTCAACAAGCTAATCCCGCTGT GCTCACGCATAGCAATCTCAATCTGGAGCAGTTTCAGTCAGCCTTTGCCTGTGCTCTCCACATGCATCAGCCCACGATTC CGGCAGGTGCGAATGGAGAACTGATCTCGCATCTGCAATACATGCTGGAGCACAGCGAAGAAGGCGATAACCACAACGCC GAACCCTTTGCCCATTGCTACAAGCGCCTCGCAGACATCATTCCCCAACTGATTGAAGAGGGATGCAACCCTCGCATCAT GCTGGATTACTCAGGCAACTTGCTCTGGGGTGTTGAGCAAATGGGCCGTGTCGACATTCTCGAGGCGCTTAAACGTCTGG CATGCGATCCCACGCTTCAACCCCATGTGGAATGGCTCGGCACCTTTTGGAGCCATGCCGTTGCACCCTCCACTCCTATT CCAGATCTGAAGCTACAAATCCTGGCCTGGCAGCATCAATTCGCTGCCATGTTTGGGCGGCAAGCATTGCAACGAGTGAA GGGTTTCTCGCCACCGGAAATGCACCTTCCCAACCATCCAGACACCCTCTATGAATTGGTGAAAGCCCTCAGAGATTGCG GATACCGTTGGCTGCTTGTTCAAGAAAACAGCGTTGAAAACTTCGATGGCTCATGCCTTCGCCATGCACAGAAATACGGC CCCAATCAACTTGTGGCTCGTAACTCCAGAGGGGAAACAGTCAGCATTGTGGCGTTGATCAAAACCCAGGGCTCAGACAC CAAATTGGTAGGACAGATGCAGCCCTATCACGAAGCATTAGGCCTGGGCAGACAATCACTGGCAGGCAAATCGATTCCAT CATTGGTCTCTCAAATTGCCGACGGAGAAAATGGAGGCGTGATGATGAATGAGTTTCCAGCCGCCTTTATCCAAGCCCAT CAAACCGTTGCTTCCCAGGTTGATCCTCTAAGCACAGTTGCGCTCAACGGCACTGAGTATCTGGAGTTGCTGGAGGCCGC CGGTGTGGAAGCCTCTGATTGCCCGAAGATACAGGCGATACAGCAACACAAGCTGTGGCATAACACTGACAGCCCCATCA ACCCCGAATCAATCGAAGCGGCCATCAGCGACCTCAAAGAAACAGACCCCTCCTTCTCGATGGACGGCGCATCCTGGACC AACAATCTCAGCTGGATCAAGGGCTATGAAAATGTGCTGGAACCGATCTACAGCCTCAGCGCCAAGTTTCACCAGCTGTT TGATCCCTTGGTGGCAAAGGATGCAACGATCACGCACACCCCCCACTATCAAGAAGCTCTGCTCTACCTGCTACTGCTAG AAACCAGTTGCTTCCGCTATTGGGGCCAAGGCACCTGGACCAACTACGCCAATGAGATCCACCGGCGCGGAGAAGCCATG ATCAACTCAGCAAACCAAGCACTTAGATAG
Upstream 100 bases:
>100_bases TTCCAGCTGACAGACAACCCGCTAGTCCACCTTCAGGTCTCGCCTTGATCAGCGCCTGCTTGAAGCTCTACCAGGCCCGT ACTACCGCAAACAAAAGTTG
Downstream 100 bases:
>100_bases GTGTTCGTCTAAACAACAAGGCAAAAGCAAAGCCTTCAACTTTGCAGTCAATCCCAAAGCGATCGCAAACATCAATAATC GGCATCGTTCCTAGAGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MPTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGELISHLQYMLEHSEEGDNHNA EPFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQMGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPI PDLKLQILAWQHQFAAMFGRQALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIADGENGGVMMNEFPAAFIQAH QTVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAIQQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWT NNLSWIKGYENVLEPIYSLSAKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAM INSANQALR
Sequences:
>Translated_489_residues MPTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGELISHLQYMLEHSEEGDNHNA EPFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQMGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPI PDLKLQILAWQHQFAAMFGRQALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIADGENGGVMMNEFPAAFIQAH QTVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAIQQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWT NNLSWIKGYENVLEPIYSLSAKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAM INSANQALR >Mature_488_residues PTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGELISHLQYMLEHSEEGDNHNAE PFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQMGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPIP DLKLQILAWQHQFAAMFGRQALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYGP NQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIADGENGGVMMNEFPAAFIQAHQ TVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAIQQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWTN NLSWIKGYENVLEPIYSLSAKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAMI NSANQALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54368; Mature: 54237
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGE CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHH LISHLQYMLEHSEEGDNHNAEPFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQ HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECHHH MGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPIPDLKLQILAWQHQFAAMFGR HCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHH QALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCC PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIA CCCEEEECCCCCEEEEEEEEECCCCCCEECCCCCHHHHHHCCCHHHHCCCHHHHHHHHHH DGENGGVMMNEFPAAFIQAHQTVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAI CCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHCCCCCCCCCHHHHH QQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWTNNLSWIKGYENVLEPIYSLS HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAM HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH INSANQALR HHHHHHHCC >Mature Secondary Structure PTQSLPPIAGYEAEILALVQQANPAVLTHSNLNLEQFQSAFACALHMHQPTIPAGANGE CCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHH LISHLQYMLEHSEEGDNHNAEPFAHCYKRLADIIPQLIEEGCNPRIMLDYSGNLLWGVEQ HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECHHH MGRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPIPDLKLQILAWQHQFAAMFGR HCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHH QALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCC PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIA CCCEEEECCCCCEEEEEEEEECCCCCCEECCCCCHHHHHHCCCHHHHCCCHHHHHHHHHH DGENGGVMMNEFPAAFIQAHQTVASQVDPLSTVALNGTEYLELLEAAGVEASDCPKIQAI CCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHCCCCCCCCCHHHHH QQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWTNNLSWIKGYENVLEPIYSLS HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AKFHQLFDPLVAKDATITHTPHYQEALLYLLLLETSCFRYWGQGTWTNYANEIHRRGEAM HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH INSANQALR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA