| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863185
Identifier: 33863185
GI number: 33863185
Start: 996191
End: 996523
Strand: Reverse
Name: 33863185
Synonym: PMT0913
Alternate gene names: NA
Gene position: 996523-996191 (Counterclockwise)
Preceding gene: 33863187
Following gene: 33863183
Centisome position: 41.33
GC content: 43.54
Gene sequence:
>333_bases ATGAACTGGCCACCCAACAAAGCTTGGACAAGTACAACTTCTCGGCTTGGTTTTCGCCATTTTGTTGCAATCAACTACGG TGGTAAGGGGTCAGATCGATGGGTGAATCTCGTTTCTGTACTTGATGGCCAAGCACGATTACGTGTGTCTTGGCAGGAAA TGAAAGACTCCTCTATGTGGAACAGTGGCTGGCAACAGCTCCCTAAACTTGAAACAAAAACACCTGATGATCAGATAGTT AATCAACAAATAGATCAAAATATGCAAGAGGCTTGTCTGCATCCTTCTGAGGATTTTGATGATCGGCAGTGGTTTGATCA AGAAAACAGTTGA
Upstream 100 bases:
>100_bases CCTGTCTTTGTTTCGTTACTAAAACTATAGATGTTTTCCATCGACTCCGAATCCTTGGTAAAAATGTATTTTCCGATTTT TGCATCGCCTTAGTCTACCT
Downstream 100 bases:
>100_bases GCTGATTAGATGCCTGACTTTTCTTTTTCTATTGATTGATAATTAAATCAAAGACCATTTACTCCCCTTTCTATTTATTA ATACCTGCTTATTCCTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MNWPPNKAWTSTTSRLGFRHFVAINYGGKGSDRWVNLVSVLDGQARLRVSWQEMKDSSMWNSGWQQLPKLETKTPDDQIV NQQIDQNMQEACLHPSEDFDDRQWFDQENS
Sequences:
>Translated_110_residues MNWPPNKAWTSTTSRLGFRHFVAINYGGKGSDRWVNLVSVLDGQARLRVSWQEMKDSSMWNSGWQQLPKLETKTPDDQIV NQQIDQNMQEACLHPSEDFDDRQWFDQENS >Mature_110_residues MNWPPNKAWTSTTSRLGFRHFVAINYGGKGSDRWVNLVSVLDGQARLRVSWQEMKDSSMWNSGWQQLPKLETKTPDDQIV NQQIDQNMQEACLHPSEDFDDRQWFDQENS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12887; Mature: 12887
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWPPNKAWTSTTSRLGFRHFVAINYGGKGSDRWVNLVSVLDGQARLRVSWQEMKDSSMW CCCCCCCCCCCHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEHHHHHCCCCHH NSGWQQLPKLETKTPDDQIVNQQIDQNMQEACLHPSEDFDDRQWFDQENS HHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MNWPPNKAWTSTTSRLGFRHFVAINYGGKGSDRWVNLVSVLDGQARLRVSWQEMKDSSMW CCCCCCCCCCCHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEHHHHHCCCCHH NSGWQQLPKLETKTPDDQIVNQQIDQNMQEACLHPSEDFDDRQWFDQENS HHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA