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The map label for this gene is psaB [H]

Identifier: 33863187

GI number: 33863187

Start: 997299

End: 997943

Strand: Reverse

Name: psaB [H]

Synonym: PMT0915

Alternate gene names: 33863187

Gene position: 997943-997299 (Counterclockwise)

Preceding gene: 33863188

Following gene: 33863185

Centisome position: 41.39

GC content: 41.4

Gene sequence:

>645_bases
ATGTCTTTATCAATCGGAAATAAAAGATTAGTTCGTGTTACTGCATTTTCTGGTGCTCTAGTACTCATAATAGGCATTAA
CCCTATACAGGCTTGGGCGAATTATTACCATCAAGCCTTACCTATGTTAGCAACTAGGAAGCTTGATAGTATTACTTATG
CTAATAAACACGAAGTTTATAGTCTTTTGTTTAAAGCCCAAGACTTAGTTTTTGACATACAGGCTATTGAGTATCCTATA
GATGATTTGAATATTGTTGTTGAAAAAGAAAAAGAGATTCTGATTGAACTTGCGGCGGATGTTCTGTTCGACTTTGACAA
AGCCAATCTAAAACCTTCTGCGATTAAATCACTTCAGGGTGTCGCCAAACGCATCCGTGAGTCTTCCCGAGGGGACGTTC
GCATCGAAGGTCATACTGACTCGAAGGGTTCGAATGAATACAATCAAACACTTTCTGAAAAGCGAGCAATTTCAGTTCGA
GATTGGTTTGTCTCTGAAGGTGGCCTAAGCAATGTTCAATTCGCAACCAAGGGCTTGGGGGAATTGAAGCCGGTGGTCTC
TAACACAACCGAAGAAGGAGCCGATGATCCAATAGGGCGCCAACGCAATCGCCGTGTTGAGATTATCATTAAAACCGGAG
ACTAG

Upstream 100 bases:

>100_bases
TTGGGCTAAGTTCCCTGCACCACCAATGGAAGTTGAGAATGTATCAGTCTACATCCCTGGGACAGCACCAATAGAGGATG
TTCGGATAGAGGGATAATCA

Downstream 100 bases:

>100_bases
TTTCTACTAGCGAGAAATTCCAATCCGATAATCTTTCTTGTTATTTAATTTCTCCTTGCCAAGTTTAGTCACGAATCTGT
ATTCTGTTCGTTCTAATCAG

Product: outer membrane protein

Products: NA

Alternate protein names: PsaB [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSLSIGNKRLVRVTAFSGALVLIIGINPIQAWANYYHQALPMLATRKLDSITYANKHEVYSLLFKAQDLVFDIQAIEYPI
DDLNIVVEKEKEILIELAADVLFDFDKANLKPSAIKSLQGVAKRIRESSRGDVRIEGHTDSKGSNEYNQTLSEKRAISVR
DWFVSEGGLSNVQFATKGLGELKPVVSNTTEEGADDPIGRQRNRRVEIIIKTGD

Sequences:

>Translated_214_residues
MSLSIGNKRLVRVTAFSGALVLIIGINPIQAWANYYHQALPMLATRKLDSITYANKHEVYSLLFKAQDLVFDIQAIEYPI
DDLNIVVEKEKEILIELAADVLFDFDKANLKPSAIKSLQGVAKRIRESSRGDVRIEGHTDSKGSNEYNQTLSEKRAISVR
DWFVSEGGLSNVQFATKGLGELKPVVSNTTEEGADDPIGRQRNRRVEIIIKTGD
>Mature_213_residues
SLSIGNKRLVRVTAFSGALVLIIGINPIQAWANYYHQALPMLATRKLDSITYANKHEVYSLLFKAQDLVFDIQAIEYPID
DLNIVVEKEKEILIELAADVLFDFDKANLKPSAIKSLQGVAKRIRESSRGDVRIEGHTDSKGSNEYNQTLSEKRAISVRD
WFVSEGGLSNVQFATKGLGELKPVVSNTTEEGADDPIGRQRNRRVEIIIKTGD

Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=125, Percent_Identity=35.2, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787191, Length=126, Percent_Identity=37.3015873015873, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788957, Length=126, Percent_Identity=31.7460317460317, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006665
- InterPro:   IPR001280
- InterPro:   IPR020586
- InterPro:   IPR006244 [H]

Pfam domain/function: PF00691 OmpA; PF00223 PsaA_PsaB [H]

EC number: NA

Molecular weight: Translated: 23860; Mature: 23729

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSIGNKRLVRVTAFSGALVLIIGINPIQAWANYYHQALPMLATRKLDSITYANKHEVY
CCCCCCCCEEEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SLLFKAQDLVFDIQAIEYPIDDLNIVVEKEKEILIELAADVLFDFDKANLKPSAIKSLQG
HHHHHHHHHEEEEHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VAKRIRESSRGDVRIEGHTDSKGSNEYNQTLSEKRAISVRDWFVSEGGLSNVQFATKGLG
HHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEHHHEEECCCCCCCCHHHHCCHH
ELKPVVSNTTEEGADDPIGRQRNRRVEIIIKTGD
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SLSIGNKRLVRVTAFSGALVLIIGINPIQAWANYYHQALPMLATRKLDSITYANKHEVY
CCCCCCCEEEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SLLFKAQDLVFDIQAIEYPIDDLNIVVEKEKEILIELAADVLFDFDKANLKPSAIKSLQG
HHHHHHHHHEEEEHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VAKRIRESSRGDVRIEGHTDSKGSNEYNQTLSEKRAISVRDWFVSEGGLSNVQFATKGLG
HHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEHHHEEECCCCCCCCHHHHCCHH
ELKPVVSNTTEEGADDPIGRQRNRRVEIIIKTGD
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]