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The map label for this gene is aapJ [H]

Identifier: 33863169

GI number: 33863169

Start: 977081

End: 978130

Strand: Reverse

Name: aapJ [H]

Synonym: PMT0897

Alternate gene names: 33863169

Gene position: 978130-977081 (Counterclockwise)

Preceding gene: 33863170

Following gene: 33863168

Centisome position: 40.57

GC content: 50.86

Gene sequence:

>1050_bases
ATGATGAGGCGTTTAACCACAGGTCTAGTCACTCTGTCTTTGCTTGCCACAGGATGTGCCTCGATTGATCAAGGTGGTGG
TTCTCGGCTGGAATTGATCAGCAAGCGCGGCCAATTGAATTGTGGTGTCAGCGGCAAGATCCCAGGCTTTAGTTTTCTAC
TTGGCAATGGTCGCTATGAAGGGCTAGACGTTGATATCTGCCGCGCTATGGCCGCTGCATTTATTGGCGATGCCACGAAA
GTGCAATATCGCCCTCTTACAGCTCCCGAACGCTTCACTGCTTTAAAAACAGGCGAAATTGATCTGCTTTCGCGGAATAC
CACATTGAATCTCAGTCGGGATGCAGCAGGAGGTAATGGTCTCACCTTTGCACCGGTGGTGTTTCACGATGGCCAGGGGT
TGATGGTCAAGCGAAGTAGCGGAATTAAGGGCCTTCAGGATTTGAAAGCCAGCAACATCTGTGTTGGCTCAGGCACCACG
ACAGAACAAAACCTCAACGATGCATTTCAGGAGCGAAAGCTTTCTTATACGCCGATCAAGTATCAAGATCTCAATCAGGT
TGTCGCCGGTTACCTTCAGGGTCGATGTCTAGCGATGACTTCCGATCGTTCTCAGCTAGCAGCGGCCCGATCTGGTTTTC
CTGATCCTGAACAGCACATCATTCTTGATGTTGTGCTGAGTAAGGAACCGCTTGCCCCAGCCTCAGTGGGTGGAGACCAG
CGGCTTGGTGATGCCATCCGATGGGTGGTCTTTGCTCTTTTTGCCGCTGAAGAATTTGGTATTACTCAAGAGAATGTCGA
CAGCAAGCTTGAACAAGCCCAGACAAACCCACAGATGTCGTCGCTGAGACGCTTTCTAGGCGTTGATGCTGGCCTTGGTC
AAAAGCTTGGTCTGGTAGATGACTTCGTTGTCAAGGTGATCCGAGCCACAGGCAATTATGGAGAGATCTACAACCGCCAC
CTCGGTCCAAACAGTTCTGTGCCAATTCCCAGAGGCCGAAATCGCTCCTATCGGCAAGGTGGCTTACTGATCGCGCCACC
ATTTAACTAA

Upstream 100 bases:

>100_bases
AAGGAATGTTTTAGTTACTGCATAGCGTCAGGTGGTAATCAATTATTCTCAAGCTTTGTCAAAGATCTGAGAGAATGAGT
CTGAATTGCATAGTTACAAC

Downstream 100 bases:

>100_bases
CCCCCCCCATGAAACGCTCGCAGCACTTTTGCTTGCAAGTTGGCGTCGCTCTCGCTCTGCTGACCATTCTTGGCGTGTTG
ATCAACAATCTCGCTGTGAA

Product: amino acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MMRRLTTGLVTLSLLATGCASIDQGGGSRLELISKRGQLNCGVSGKIPGFSFLLGNGRYEGLDVDICRAMAAAFIGDATK
VQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNGLTFAPVVFHDGQGLMVKRSSGIKGLQDLKASNICVGSGTT
TEQNLNDAFQERKLSYTPIKYQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
RLGDAIRWVVFALFAAEEFGITQENVDSKLEQAQTNPQMSSLRRFLGVDAGLGQKLGLVDDFVVKVIRATGNYGEIYNRH
LGPNSSVPIPRGRNRSYRQGGLLIAPPFN

Sequences:

>Translated_349_residues
MMRRLTTGLVTLSLLATGCASIDQGGGSRLELISKRGQLNCGVSGKIPGFSFLLGNGRYEGLDVDICRAMAAAFIGDATK
VQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNGLTFAPVVFHDGQGLMVKRSSGIKGLQDLKASNICVGSGTT
TEQNLNDAFQERKLSYTPIKYQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
RLGDAIRWVVFALFAAEEFGITQENVDSKLEQAQTNPQMSSLRRFLGVDAGLGQKLGLVDDFVVKVIRATGNYGEIYNRH
LGPNSSVPIPRGRNRSYRQGGLLIAPPFN
>Mature_349_residues
MMRRLTTGLVTLSLLATGCASIDQGGGSRLELISKRGQLNCGVSGKIPGFSFLLGNGRYEGLDVDICRAMAAAFIGDATK
VQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNGLTFAPVVFHDGQGLMVKRSSGIKGLQDLKASNICVGSGTT
TEQNLNDAFQERKLSYTPIKYQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
RLGDAIRWVVFALFAAEEFGITQENVDSKLEQAQTNPQMSSLRRFLGVDAGLGQKLGLVDDFVVKVIRATGNYGEIYNRH
LGPNSSVPIPRGRNRSYRQGGLLIAPPFN

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=207, Percent_Identity=27.536231884058, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 37536; Mature: 37536

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRLTTGLVTLSLLATGCASIDQGGGSRLELISKRGQLNCGVSGKIPGFSFLLGNGRYE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC
GLDVDICRAMAAAFIGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG
CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHEEEECCCEEEEECCCEEEEECCCCCCCC
LTFAPVVFHDGQGLMVKRSSGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK
CEEEEEEEECCCEEEEECCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCC
YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
HHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCH
RLGDAIRWVVFALFAAEEFGITQENVDSKLEQAQTNPQMSSLRRFLGVDAGLGQKLGLVD
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHH
DFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGRNRSYRQGGLLIAPPFN
HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MMRRLTTGLVTLSLLATGCASIDQGGGSRLELISKRGQLNCGVSGKIPGFSFLLGNGRYE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC
GLDVDICRAMAAAFIGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG
CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHEEEECCCEEEEECCCEEEEECCCCCCCC
LTFAPVVFHDGQGLMVKRSSGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK
CEEEEEEEECCCEEEEECCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCC
YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
HHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCH
RLGDAIRWVVFALFAAEEFGITQENVDSKLEQAQTNPQMSSLRRFLGVDAGLGQKLGLVD
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHH
DFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGRNRSYRQGGLLIAPPFN
HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]