| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863145
Identifier: 33863145
GI number: 33863145
Start: 956568
End: 957635
Strand: Reverse
Name: 33863145
Synonym: PMT0873
Alternate gene names: NA
Gene position: 957635-956568 (Counterclockwise)
Preceding gene: 33863149
Following gene: 33863138
Centisome position: 39.72
GC content: 50.56
Gene sequence:
>1068_bases ATGGACGGCAGCGTAAGCGGCGGCGGGCTGATCAGTGCCATCGAGCCTTTGTTGGTTAGTTCCGGTAGCGTCATCTTTAC CTTTGAGTTGGTTGTCATGGGGAAACGCCACCTCGCTCTAATGCTTTTCAGCGCTGGGGTTCTAAGCCTCATGGGTAGCT TGGCTTTGAAGTCACTAAGTACCACGAATGTTTTTGTGGCGGAACGCCAATCGGCATCAAAAGATTCGATTCTGCCAAGC GATGCCGATCGGCCACGTATGGCTGATGGGCGTCATTACCCCATCGTTCCAGATGATCCGATCAAGCTTGCGGATCTTCT TCAAGAGGTAGAAGAAGCGTTGCTTCAACCATCAACACCTGAAGAAGATCTACCAAGCCTTGGCCATCAACAACAGCTCA TCTACCGGGTGTTGTCTAAGGATCTACCCACTTCTAATAAGGTGCTGGCTCACTTGCCGAGCCGTTGGCGTCATGTGGCT GAACGGCATTTAGCCGCAAGGCGTGAGTTTCTTGCGATGCACAGGAGATCCTTTAGACCTCGCTTAATGCCGGCCTGGAG AATCATTCCGCCCGAGCCTGCAGAGAAGTTATTGAGCTATTACCGCAAAGCAGAAAGTTCAACTGGTATCGATTGGGAAG TTTTGGCGGCAGTGAACCTTGTTGAGACAGGAATGGGCCGCATCGATGGTCTCTCTGTAGCTAATGCTCAAGGACCGATG CAGTTTTTGCCAACAACTTGGCAAGAGAATGGTATTGGAGAAGGTGACATCCGTGACCCCCATGACGCGATTCAGGCAGC CGCGCGCTATCTAGTACGCCGCGGCGGGCTACAAGATATCCGTAAAGGGTTGTGGGGATATAACAATAGCGACCATTACG GAAGGGCCGTGCTCGAATACACAGCCTTATTGAAGGAAGATCCGCGCGCATTCACTGGGCTTTATCATTGGGAAATTCAC TTTGACATTGATGCTGGGGATTTATGGCTGCCTGTTGGTTATAACCAAAACAAGCCAATTCCTGTGTCTACCTATTTAAG GAAGTTTCCAGCAAGTAGCCCAAGATAA
Upstream 100 bases:
>100_bases TAGCTCCGCATAGCGGGCTACGTCCTCGCTGGACCAGCCAAGTTCTTTGAGCTCATCAGCTCGGTGAGTGGATTCCTTGG CCACGCGAGGGTTTCATGTA
Downstream 100 bases:
>100_bases CCACTTTGATCAATGCAGAATGGTCAGGAGGATGATCAATGGCTAACATATTATGAATTAGGCTATAAAAACTCAATAGT TTTAATCCCCGCACATGGAG
Product: transglycosylase SLT domain-containing protein
Products: NA
Alternate protein names: NLP/P60 Protein; Transglycosylase SLT Domain-Containing Protein; Peptidase; Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Transglycosylase Family Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MDGSVSGGGLISAIEPLLVSSGSVIFTFELVVMGKRHLALMLFSAGVLSLMGSLALKSLSTTNVFVAERQSASKDSILPS DADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTPEEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVA ERHLAARREFLAMHRRSFRPRLMPAWRIIPPEPAEKLLSYYRKAESSTGIDWEVLAAVNLVETGMGRIDGLSVANAQGPM QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEYTALLKEDPRAFTGLYHWEIH FDIDAGDLWLPVGYNQNKPIPVSTYLRKFPASSPR
Sequences:
>Translated_355_residues MDGSVSGGGLISAIEPLLVSSGSVIFTFELVVMGKRHLALMLFSAGVLSLMGSLALKSLSTTNVFVAERQSASKDSILPS DADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTPEEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVA ERHLAARREFLAMHRRSFRPRLMPAWRIIPPEPAEKLLSYYRKAESSTGIDWEVLAAVNLVETGMGRIDGLSVANAQGPM QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEYTALLKEDPRAFTGLYHWEIH FDIDAGDLWLPVGYNQNKPIPVSTYLRKFPASSPR >Mature_355_residues MDGSVSGGGLISAIEPLLVSSGSVIFTFELVVMGKRHLALMLFSAGVLSLMGSLALKSLSTTNVFVAERQSASKDSILPS DADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTPEEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVA ERHLAARREFLAMHRRSFRPRLMPAWRIIPPEPAEKLLSYYRKAESSTGIDWEVLAAVNLVETGMGRIDGLSVANAQGPM QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEYTALLKEDPRAFTGLYHWEIH FDIDAGDLWLPVGYNQNKPIPVSTYLRKFPASSPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39548; Mature: 39548
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGSVSGGGLISAIEPLLVSSGSVIFTFELVVMGKRHLALMLFSAGVLSLMGSLALKSLS CCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCC TTNVFVAERQSASKDSILPSDADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTP CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC EEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVAERHLAARREFLAMHRRSFRP HHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC RLMPAWRIIPPEPAEKLLSYYRKAESSTGIDWEVLAAVNLVETGMGRIDGLSVANAQGPM CCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCH QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEY HHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH TALLKEDPRAFTGLYHWEIHFDIDAGDLWLPVGYNQNKPIPVSTYLRKFPASSPR HHHHHCCCHHHHEEEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MDGSVSGGGLISAIEPLLVSSGSVIFTFELVVMGKRHLALMLFSAGVLSLMGSLALKSLS CCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCC TTNVFVAERQSASKDSILPSDADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTP CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC EEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVAERHLAARREFLAMHRRSFRP HHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC RLMPAWRIIPPEPAEKLLSYYRKAESSTGIDWEVLAAVNLVETGMGRIDGLSVANAQGPM CCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCH QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEY HHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH TALLKEDPRAFTGLYHWEIHFDIDAGDLWLPVGYNQNKPIPVSTYLRKFPASSPR HHHHHCCCHHHHEEEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA