| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863144
Identifier: 33863144
GI number: 33863144
Start: 955447
End: 956262
Strand: Direct
Name: 33863144
Synonym: PMT0872
Alternate gene names: NA
Gene position: 955447-956262 (Clockwise)
Preceding gene: 33863143
Following gene: 33863146
Centisome position: 39.63
GC content: 41.67
Gene sequence:
>816_bases ATGCCAAAACTCCCCCCTGAACATAAGTTTTGGGACCTGTCAGATTATGCACGTCCAGGAGCAATATGGCTGGTAAAACA ACTGCTACCTACATCGATAGGCGCTATCACATTGACATGGCTATTTACCGCAGTAGGCCTAGTCAGTGTGGTGCTAATTT TTAATCGTTATGCACTTACACTTGCAGGCTCACTACTGATCTTAAAAAGCTTGCTTGATGCGGCAGATGGTGAAATGGCT CGCGCAAGAAATCGACCATCACATACTGGTAGATACTTGGACTCAATAAATGATTTAATTCTGAACGGGCTTGTGTTGTT TTCGATTGGCATCCCGCTGATGATACCTGTTTGGAAAATTACGCTGACCTGGATCTCATTTCAACTACAAGGGACCATAT TTAATTATTTTTATGTGATTAAAAGGCATCAGGCATCCGGGGATAAAACAAGCCGTATATCCGAAGTGACATCTCCAGTT CCTTACCCTCAAGAGAACCCAAGAGTCTTATTTATGCTTCATAAGCTATATCTAATTTTTTACGGGTGGCAGGACTGGAT TATCGACACAATGTTCAAGGGCAATCAAATAACCAACTCAAGATCTCGCCCAATCCCAAACTGGATTATGAGCTTAATCT CAATCTTTGGATTGGGATTCCAACTACTGATTATAGCGATACTTCTCTGCACCAATAACCTAGAGCTAACCTTCCCTATC TTTTTGGTCGTCTACAACATCATCGCGGCACTGGTTGTATTTAGTGTTTTAATATTAGGGTCAAAAAAGTTACAGAAAAG GGCCGAAAGGCTCTAG
Upstream 100 bases:
>100_bases ACAACATGCAGCATGTATCTCAAATCCATAGTCAAAGATTGACAAGTCTTGATCCTAAAACTATTGCGATTTCTGCTAAG CCAGCAATAACACTACTATA
Downstream 100 bases:
>100_bases CTGCAAATTTATAGTCAATCTTCATTGAAGGAGAGATATTAACTATAATCCACTAGTTCAAGATCAACCCAATAACATTT TCTGCAAAGAGCAGGTTTCC
Product: CDP-alcohol phosphatidyltransferase
Products: NA
Alternate protein names: CDP-Alcohol Phosphatidyltransferase Class-I Family Protein; Cdp-Alcohol Phosphatidyltransferase
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MPKLPPEHKFWDLSDYARPGAIWLVKQLLPTSIGAITLTWLFTAVGLVSVVLIFNRYALTLAGSLLILKSLLDAADGEMA RARNRPSHTGRYLDSINDLILNGLVLFSIGIPLMIPVWKITLTWISFQLQGTIFNYFYVIKRHQASGDKTSRISEVTSPV PYPQENPRVLFMLHKLYLIFYGWQDWIIDTMFKGNQITNSRSRPIPNWIMSLISIFGLGFQLLIIAILLCTNNLELTFPI FLVVYNIIAALVVFSVLILGSKKLQKRAERL
Sequences:
>Translated_271_residues MPKLPPEHKFWDLSDYARPGAIWLVKQLLPTSIGAITLTWLFTAVGLVSVVLIFNRYALTLAGSLLILKSLLDAADGEMA RARNRPSHTGRYLDSINDLILNGLVLFSIGIPLMIPVWKITLTWISFQLQGTIFNYFYVIKRHQASGDKTSRISEVTSPV PYPQENPRVLFMLHKLYLIFYGWQDWIIDTMFKGNQITNSRSRPIPNWIMSLISIFGLGFQLLIIAILLCTNNLELTFPI FLVVYNIIAALVVFSVLILGSKKLQKRAERL >Mature_270_residues PKLPPEHKFWDLSDYARPGAIWLVKQLLPTSIGAITLTWLFTAVGLVSVVLIFNRYALTLAGSLLILKSLLDAADGEMAR ARNRPSHTGRYLDSINDLILNGLVLFSIGIPLMIPVWKITLTWISFQLQGTIFNYFYVIKRHQASGDKTSRISEVTSPVP YPQENPRVLFMLHKLYLIFYGWQDWIIDTMFKGNQITNSRSRPIPNWIMSLISIFGLGFQLLIIAILLCTNNLELTFPIF LVVYNIIAALVVFSVLILGSKKLQKRAERL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30808; Mature: 30677
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLPPEHKFWDLSDYARPGAIWLVKQLLPTSIGAITLTWLFTAVGLVSVVLIFNRYALT CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGSLLILKSLLDAADGEMARARNRPSHTGRYLDSINDLILNGLVLFSIGIPLMIPVWKI HHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TLTWISFQLQGTIFNYFYVIKRHQASGDKTSRISEVTSPVPYPQENPRVLFMLHKLYLIF HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH YGWQDWIIDTMFKGNQITNSRSRPIPNWIMSLISIFGLGFQLLIIAILLCTNNLELTFPI HCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHH FLVVYNIIAALVVFSVLILGSKKLQKRAERL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure PKLPPEHKFWDLSDYARPGAIWLVKQLLPTSIGAITLTWLFTAVGLVSVVLIFNRYALT CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGSLLILKSLLDAADGEMARARNRPSHTGRYLDSINDLILNGLVLFSIGIPLMIPVWKI HHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TLTWISFQLQGTIFNYFYVIKRHQASGDKTSRISEVTSPVPYPQENPRVLFMLHKLYLIF HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH YGWQDWIIDTMFKGNQITNSRSRPIPNWIMSLISIFGLGFQLLIIAILLCTNNLELTFPI HCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHH FLVVYNIIAALVVFSVLILGSKKLQKRAERL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA