| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863146
Identifier: 33863146
GI number: 33863146
Start: 957652
End: 958347
Strand: Direct
Name: 33863146
Synonym: PMT0874
Alternate gene names: NA
Gene position: 957652-958347 (Clockwise)
Preceding gene: 33863144
Following gene: 33863147
Centisome position: 39.72
GC content: 54.02
Gene sequence:
>696_bases GTGGCCAAGGAATCCACTCACCGAGCTGATGAGCTCAAAGAACTTGGCTGGTCCAGCGAGGACGTAGCCCGCTATGCGGA GCTATGGGACTACCGGCAGCGTTGGGGTGCAATGAACTTGGAACGAGAGGACCGCCAGTTCCTAAGAAAGGCTGAAGCCG CACTGCCAGCAATCGTCACTGGCAAGGCTGCAGCCAAAAAAGCCACTGAGGACAAGTCTTATTACCGCAGGCTCCGCTTC TATCTCCAGGCCATGAATGAAGCAGAGTTAGCTCTCGCACTTGAAGAGAACGCTCGTGGCGCATGGCCTATCCTGCTGGA AGAAGAATTGCGCGCTCTCGACTATTACGAACCTGTTCTCGGCCTACCAGACACCCTCAAGGCCAAGAAGTTCGATGCTG TACGTGAATCGATTGCAAACCGTGCATCAAAGCTTGCTGATCAGCAGGGCCTTGTGGTGAGTTTTGATTTCCAGGCCCCC CTCAACGCTCTCAAAGCTCAAGAGCCGACAAAATGGCGCCAATTAAGAGAAGAAGACACTTCAGCTGATCAGAGCTATCC CATACTCAATGCGTCTGTGGTCGAAGGATTCCGCCAGGAAGTGAGGGCCGAATTGGTGCCCTTGATTCGCGAAACACTGC CATCCTTAGCAAAGACAGATAAAGCTGCTCCACCGGACGACTGGAACCGCGCCTGA
Upstream 100 bases:
>100_bases AAAGGTAAAGATGACGCTACCGGAACTAACCAACAAAGGCTCGATGGCACTGATCAGCCCGCCGCCGCTTACGCTGCCGT CCATTACATGAAACCCTCGC
Downstream 100 bases:
>100_bases GACTAAGTTGCTAGAAAGAAGGGACCTTCCTGTTTACGTGTAGTTGACTTCACATCGCTTCGAAACCCTCCAGCTTCATG CCGGCCAGGTAGCTGATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVTGKAAAKKATEDKSYYRRLRF YLQAMNEAELALALEENARGAWPILLEEELRALDYYEPVLGLPDTLKAKKFDAVRESIANRASKLADQQGLVVSFDFQAP LNALKAQEPTKWRQLREEDTSADQSYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKAAPPDDWNRA
Sequences:
>Translated_231_residues MAKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVTGKAAAKKATEDKSYYRRLRF YLQAMNEAELALALEENARGAWPILLEEELRALDYYEPVLGLPDTLKAKKFDAVRESIANRASKLADQQGLVVSFDFQAP LNALKAQEPTKWRQLREEDTSADQSYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKAAPPDDWNRA >Mature_230_residues AKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVTGKAAAKKATEDKSYYRRLRFY LQAMNEAELALALEENARGAWPILLEEELRALDYYEPVLGLPDTLKAKKFDAVRESIANRASKLADQQGLVVSFDFQAPL NALKAQEPTKWRQLREEDTSADQSYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKAAPPDDWNRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26383; Mature: 26252
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVT CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHC GKAAAKKATEDKSYYRRLRFYLQAMNEAELALALEENARGAWPILLEEELRALDYYEPVL CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC GLPDTLKAKKFDAVRESIANRASKLADQQGLVVSFDFQAPLNALKAQEPTKWRQLREEDT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHC SADQSYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKAAPPDDWNRA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVT CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHC GKAAAKKATEDKSYYRRLRFYLQAMNEAELALALEENARGAWPILLEEELRALDYYEPVL CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC GLPDTLKAKKFDAVRESIANRASKLADQQGLVVSFDFQAPLNALKAQEPTKWRQLREEDT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHC SADQSYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKAAPPDDWNRA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA