| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863081
Identifier: 33863081
GI number: 33863081
Start: 884981
End: 885580
Strand: Reverse
Name: 33863081
Synonym: PMT0809
Alternate gene names: NA
Gene position: 885580-884981 (Counterclockwise)
Preceding gene: 33863083
Following gene: 33863080
Centisome position: 36.73
GC content: 52.5
Gene sequence:
>600_bases ATGATTAATGCAACAACCACTTCAGATCCTTCATCAACTGTTCAGCCACAGAAACCCTTTGAGCAAAAGCAGAGCGGCGT GCAGAACAACACCGTTCTTGGCAGGAGAGGACTTGAGCGTCTAGACCTTCTCTTGCTTGTGGTCGAATCACTTGATCTCA ATGGTGGTGAGGCGATGCTCTGGGCAACCAATCAGTTGGGTTTGCAGAAACAGTTCCCCAACCGGGTTGAGCTTTGGAAG CGACGTTGTCACAATCCACTGAGACGCGCTACCCGTCGAGGTGACCTCAGTTCTATTGATACTGAGGCTTTGCTTCGCCT GCTTTGTTTTATGGCAAGCCGTCTTTATCCCCTTCTTCATCAGCTGCTTTCATCACGTGAACCAGAAGAACTCAATTTGC AGCGCTGGACTTTGCTGGATCAGCGACTGCGCGATCTGATCGAGGAGAGGATGAATCCTCGGCGCGGAGCTGTTCAGCGT CTGTTGAGGCCAGAGCAATCTCAGCCTATTCAGCGTGAGCTGGTGCTTACGCTTGCTCTTGCTGCTGGTAATGGAGGAGT CGATCGCCTGCGCGCCAGCCTGCTTGATCCGACACCCTGA
Upstream 100 bases:
>100_bases GAGAATTCCAGGTTTTGGAAAGTCTGGTACGTCTTGAATGAGGTGGCGAAGATCCAAAGAGTGGTGACGCAGGGGCCTTA GGCCTGGCATCATCGCAGCC
Downstream 100 bases:
>100_bases TGCTGAATCTCTCTTTCCGTTATGACCAAACGGCAGTCCGCCTTCAGGTGGAGGGCCTGCCAGATTTCTCCGCAGGTCAC GGGGATGGTGTTCTAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MINATTTSDPSSTVQPQKPFEQKQSGVQNNTVLGRRGLERLDLLLLVVESLDLNGGEAMLWATNQLGLQKQFPNRVELWK RRCHNPLRRATRRGDLSSIDTEALLRLLCFMASRLYPLLHQLLSSREPEELNLQRWTLLDQRLRDLIEERMNPRRGAVQR LLRPEQSQPIQRELVLTLALAAGNGGVDRLRASLLDPTP
Sequences:
>Translated_199_residues MINATTTSDPSSTVQPQKPFEQKQSGVQNNTVLGRRGLERLDLLLLVVESLDLNGGEAMLWATNQLGLQKQFPNRVELWK RRCHNPLRRATRRGDLSSIDTEALLRLLCFMASRLYPLLHQLLSSREPEELNLQRWTLLDQRLRDLIEERMNPRRGAVQR LLRPEQSQPIQRELVLTLALAAGNGGVDRLRASLLDPTP >Mature_199_residues MINATTTSDPSSTVQPQKPFEQKQSGVQNNTVLGRRGLERLDLLLLVVESLDLNGGEAMLWATNQLGLQKQFPNRVELWK RRCHNPLRRATRRGDLSSIDTEALLRLLCFMASRLYPLLHQLLSSREPEELNLQRWTLLDQRLRDLIEERMNPRRGAVQR LLRPEQSQPIQRELVLTLALAAGNGGVDRLRASLLDPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22716; Mature: 22716
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINATTTSDPSSTVQPQKPFEQKQSGVQNNTVLGRRGLERLDLLLLVVESLDLNGGEAML CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE WATNQLGLQKQFPNRVELWKRRCHNPLRRATRRGDLSSIDTEALLRLLCFMASRLYPLLH EECCHHCCHHHCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH QLLSSREPEELNLQRWTLLDQRLRDLIEERMNPRRGAVQRLLRPEQSQPIQRELVLTLAL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH AAGNGGVDRLRASLLDPTP HCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MINATTTSDPSSTVQPQKPFEQKQSGVQNNTVLGRRGLERLDLLLLVVESLDLNGGEAML CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE WATNQLGLQKQFPNRVELWKRRCHNPLRRATRRGDLSSIDTEALLRLLCFMASRLYPLLH EECCHHCCHHHCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH QLLSSREPEELNLQRWTLLDQRLRDLIEERMNPRRGAVQRLLRPEQSQPIQRELVLTLAL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH AAGNGGVDRLRASLLDPTP HCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA