Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863080

Identifier: 33863080

GI number: 33863080

Start: 884364

End: 884981

Strand: Reverse

Name: 33863080

Synonym: PMT0808

Alternate gene names: NA

Gene position: 884981-884364 (Counterclockwise)

Preceding gene: 33863081

Following gene: 33863079

Centisome position: 36.71

GC content: 52.91

Gene sequence:

>618_bases
ATGCTGAATCTCTCTTTCCGTTATGACCAAACGGCAGTCCGCCTTCAGGTGGAGGGCCTGCCAGATTTCTCCGCAGGTCA
CGGGGATGGTGTTCTAGGCATCCTGTCGAGTTGGCGGCTGCAGTTGGTTGGTTCACCAGAGCTAGAAGGCAAACGTGAAC
ATTTGCAGGCCTTGATGGCTGCTGTGCTCCCCTATTCACGCCACCGCATTTCTGGTGTCAGTCGAGCTTTTGGTGACGAA
ACCAGTGTGGTTGTTATGTCTCCTGTTGGGGACAGACATCAACTGCTTTTGCGTAGTAGTCAGCCGAATGTCCCTCCTCT
CACTCTTAACCTTGATGATGCAGAGCTTGCTGATCTCGTGCGTTGTCTGGATGAACTTCGTCTTGACTCACGAGTGCAGG
TTCACTGGGAGTTGCCAATTGATTACCCATTGCCTCGACAGGAATTGGCCGAGCGAGTCCCTCTTGGCCAACGCTTAGGA
GCTCCATTGATTGGTGGCGCAGCATTGGTTTTGATTGCAGGTCTTGGTCTGTTGCTGCCTGTTCCACGCAATCCAGATGG
AACGCTGTCCCCTGCCACTTCTAATGCGCCAGAGTTGCAATCACGTTCTGATCGTTGA

Upstream 100 bases:

>100_bases
CTCAGCCTATTCAGCGTGAGCTGGTGCTTACGCTTGCTCTTGCTGCTGGTAATGGAGGAGTCGATCGCCTGCGCGCCAGC
CTGCTTGATCCGACACCCTG

Downstream 100 bases:

>100_bases
CGAACAGATCTTGCAGGCCAGAATTACGGTCTATTGAAAACACTTTTATACCTCCCATTGGCAGGTATGCAGGCTTGAAG
ATCGAATTAATCGTGTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLNLSFRYDQTAVRLQVEGLPDFSAGHGDGVLGILSSWRLQLVGSPELEGKREHLQALMAAVLPYSRHRISGVSRAFGDE
TSVVVMSPVGDRHQLLLRSSQPNVPPLTLNLDDAELADLVRCLDELRLDSRVQVHWELPIDYPLPRQELAERVPLGQRLG
APLIGGAALVLIAGLGLLLPVPRNPDGTLSPATSNAPELQSRSDR

Sequences:

>Translated_205_residues
MLNLSFRYDQTAVRLQVEGLPDFSAGHGDGVLGILSSWRLQLVGSPELEGKREHLQALMAAVLPYSRHRISGVSRAFGDE
TSVVVMSPVGDRHQLLLRSSQPNVPPLTLNLDDAELADLVRCLDELRLDSRVQVHWELPIDYPLPRQELAERVPLGQRLG
APLIGGAALVLIAGLGLLLPVPRNPDGTLSPATSNAPELQSRSDR
>Mature_205_residues
MLNLSFRYDQTAVRLQVEGLPDFSAGHGDGVLGILSSWRLQLVGSPELEGKREHLQALMAAVLPYSRHRISGVSRAFGDE
TSVVVMSPVGDRHQLLLRSSQPNVPPLTLNLDDAELADLVRCLDELRLDSRVQVHWELPIDYPLPRQELAERVPLGQRLG
APLIGGAALVLIAGLGLLLPVPRNPDGTLSPATSNAPELQSRSDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22323; Mature: 22323

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLSFRYDQTAVRLQVEGLPDFSAGHGDGVLGILSSWRLQLVGSPELEGKREHLQALMA
CCCCCEEECCEEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
AVLPYSRHRISGVSRAFGDETSVVVMSPVGDRHQLLLRSSQPNVPPLTLNLDDAELADLV
HHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHEEEECCCCCCCEEEEECCHHHHHHHH
RCLDELRLDSRVQVHWELPIDYPLPRQELAERVPLGQRLGAPLIGGAALVLIAGLGLLLP
HHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHEEE
VPRNPDGTLSPATSNAPELQSRSDR
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNLSFRYDQTAVRLQVEGLPDFSAGHGDGVLGILSSWRLQLVGSPELEGKREHLQALMA
CCCCCEEECCEEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
AVLPYSRHRISGVSRAFGDETSVVVMSPVGDRHQLLLRSSQPNVPPLTLNLDDAELADLV
HHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHEEEECCCCCCCEEEEECCHHHHHHHH
RCLDELRLDSRVQVHWELPIDYPLPRQELAERVPLGQRLGAPLIGGAALVLIAGLGLLLP
HHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHEEE
VPRNPDGTLSPATSNAPELQSRSDR
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA