| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is yfeJ [H]
Identifier: 33863070
GI number: 33863070
Start: 874274
End: 875119
Strand: Reverse
Name: yfeJ [H]
Synonym: PMT0798
Alternate gene names: 33863070
Gene position: 875119-874274 (Counterclockwise)
Preceding gene: 33863071
Following gene: 33863069
Centisome position: 36.3
GC content: 47.52
Gene sequence:
>846_bases TTGAGCTCGTTTCAGCAGCCAACCCTTATCAATCAGGCTGTTGGTACTGCTGTAGCAGTTAACCTCAACAATATTAGTGT GACAAATTCATTTTCTATTCAAATGACACGCCTCTTTGTTGTTCAACATTTAGACCGTGAAACTCCTGGCTTGTTTGAAG ACCTTGCACAACAACACGGGATGTCAGTCCACGTCATCCGTGTGGACCTAGGGGAACCTTTGCCTTCTTTGGTTAAAGGA GATGGTTTGCTGGTCCTAGGAGGGCCGATGGGCGTAGGCGATCTGCATAACCCAGCCTTCCCATGGTTAGAGGATGAGGT TCTTTTAATTCAACAAGCCTTGGAGCATCAGATCCCTTTTGTTGGTGTCTGTCTTGGCGCACAATTACTTGCACATGCTT GTGGTGGTGGCGTTGAACCGCTGTTGGGTGGCGATCCACCGCGACCACTTGCGGAGGTCGGGTGGGCACCAATTACATCC ACGCTCGAGGCAGGAAATCAGTCAGTCATCAGGTCTTTAATCCAGCCACTGGATGTTTTGCATTGGCATGGCGACAGGAT AATTCTGCCTAAAAATGCCAACGTTCTTGCCAGTAGTGTTCGCTGCCGTGAGCAATTGTTCAGAATTGGCCCATTGGCTT ATGGACTCCAGTTTCATCTAGAAGTCGAGGATGAAGATGTTTTTCGTTGGATTGCTGAAGACAATGATTTCATCTGTGCA GCCCTTGGCGATAACGCAGCAGATATTTTGCGTGATCAGCAGCAATTGTATAGTAGTAGCAGTAGACCTAGGCGGCTAAA GCTACTTTCAGATTTGTTTAGCGAGCTTTGGCCATCACAATTTTAG
Upstream 100 bases:
>100_bases TAATAAATCAAATCTGCCTGTTGTAAATGTCATTGATAACCACAAGGTATTATTTTATAGCCACTGTTTTTTTCTTGCTT TAGTTGCATTTATTTGTTTA
Downstream 100 bases:
>100_bases ATCATTGGATATTCTGCAATCTATTGCTGCAGAATCTTAACTACTTAAAGTTTAATTGAGCAATTTATACTTAAAAACCA GTCTCTATGCTTTTTGTATA
Product: glutamine amidotransferase class-I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSSFQQPTLINQAVGTAVAVNLNNISVTNSFSIQMTRLFVVQHLDRETPGLFEDLAQQHGMSVHVIRVDLGEPLPSLVKG DGLLVLGGPMGVGDLHNPAFPWLEDEVLLIQQALEHQIPFVGVCLGAQLLAHACGGGVEPLLGGDPPRPLAEVGWAPITS TLEAGNQSVIRSLIQPLDVLHWHGDRIILPKNANVLASSVRCREQLFRIGPLAYGLQFHLEVEDEDVFRWIAEDNDFICA ALGDNAADILRDQQQLYSSSSRPRRLKLLSDLFSELWPSQF
Sequences:
>Translated_281_residues MSSFQQPTLINQAVGTAVAVNLNNISVTNSFSIQMTRLFVVQHLDRETPGLFEDLAQQHGMSVHVIRVDLGEPLPSLVKG DGLLVLGGPMGVGDLHNPAFPWLEDEVLLIQQALEHQIPFVGVCLGAQLLAHACGGGVEPLLGGDPPRPLAEVGWAPITS TLEAGNQSVIRSLIQPLDVLHWHGDRIILPKNANVLASSVRCREQLFRIGPLAYGLQFHLEVEDEDVFRWIAEDNDFICA ALGDNAADILRDQQQLYSSSSRPRRLKLLSDLFSELWPSQF >Mature_280_residues SSFQQPTLINQAVGTAVAVNLNNISVTNSFSIQMTRLFVVQHLDRETPGLFEDLAQQHGMSVHVIRVDLGEPLPSLVKGD GLLVLGGPMGVGDLHNPAFPWLEDEVLLIQQALEHQIPFVGVCLGAQLLAHACGGGVEPLLGGDPPRPLAEVGWAPITST LEAGNQSVIRSLIQPLDVLHWHGDRIILPKNANVLASSVRCREQLFRIGPLAYGLQFHLEVEDEDVFRWIAEDNDFICAA LGDNAADILRDQQQLYSSSSRPRRLKLLSDLFSELWPSQF
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 30829; Mature: 30697
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFQQPTLINQAVGTAVAVNLNNISVTNSFSIQMTRLFVVQHLDRETPGLFEDLAQQHG CCCCCCCHHHHHHHCCEEEEEECCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC MSVHVIRVDLGEPLPSLVKGDGLLVLGGPMGVGDLHNPAFPWLEDEVLLIQQALEHQIPF CEEEEEEEECCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC VGVCLGAQLLAHACGGGVEPLLGGDPPRPLAEVGWAPITSTLEAGNQSVIRSLIQPLDVL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHH HWHGDRIILPKNANVLASSVRCREQLFRIGPLAYGLQFHLEVEDEDVFRWIAEDNDFICA EECCCEEEECCCCHHHHHHHHHHHHHHHHCCEEECEEEEEEECHHHHHHHHCCCCCEEEE ALGDNAADILRDQQQLYSSSSRPRRLKLLSDLFSELWPSQF ECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSFQQPTLINQAVGTAVAVNLNNISVTNSFSIQMTRLFVVQHLDRETPGLFEDLAQQHG CCCCCCHHHHHHHCCEEEEEECCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC MSVHVIRVDLGEPLPSLVKGDGLLVLGGPMGVGDLHNPAFPWLEDEVLLIQQALEHQIPF CEEEEEEEECCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC VGVCLGAQLLAHACGGGVEPLLGGDPPRPLAEVGWAPITSTLEAGNQSVIRSLIQPLDVL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHH HWHGDRIILPKNANVLASSVRCREQLFRIGPLAYGLQFHLEVEDEDVFRWIAEDNDFICA EECCCEEEECCCCHHHHHHHHHHHHHHHHCCEEECEEEEEEECHHHHHHHHCCCCCEEEE ALGDNAADILRDQQQLYSSSSRPRRLKLLSDLFSELWPSQF ECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]