| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863059
Identifier: 33863059
GI number: 33863059
Start: 861736
End: 862185
Strand: Reverse
Name: 33863059
Synonym: PMT0787
Alternate gene names: NA
Gene position: 862185-861736 (Counterclockwise)
Preceding gene: 33863061
Following gene: 33863058
Centisome position: 35.76
GC content: 50.0
Gene sequence:
>450_bases ATGGACGTTCGTTTCCGCGAGGTTGATCCATTCAACTGTTGGCTATGGCTTCACTTTGCCGATGTACCAAGCCAGGGTGA GCAAAATTACGTCGATGGCATCTTTGATAGTTGGTACGTGATTGGCCGTTTGGGTGGATTTAATGCTGAGAACCTACAAG TCCATGAGGAAGGTGCTGATCTCAGCTGGATCACTTACGACAATGAAGACGCCAGATCCGTGATCCCTGCGCTGATGCAC AACATGGGCCAGTTGGAATATCAAGGCTGCTGGGCACGTTGTTGGGTTGATCTTGGTACAAGTGATGCTGTAGCACTTGA TGTCTTGATCAACGCTCTCCAACAAATTGACTCCGATGTGGTGCAGTTGGATGAAGTGTTGATTGGTGGTGTCAATGATG ACTGGCCTGTTGAGCCCCATCCCGACAGCATCTTCCCTGTGGAGGCCTAG
Upstream 100 bases:
>100_bases GCTCACAGCAGCTAATGATCCTCCAATTTGATTGATGAATGCTTGCTTATGCAGACGGATCTGTCGAATGCCGCGATGAT GCAGCCATCGTCGAGCTTTC
Downstream 100 bases:
>100_bases GCAGTCTCTTGGCTGAGCTCAGGCGCCTTTTGGTTGAATCGCAGCGGTTTGATGCAATCACTGCTTCTGACCATTTGTTA TCTCTCAAGCAAGACGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MDVRFREVDPFNCWLWLHFADVPSQGEQNYVDGIFDSWYVIGRLGGFNAENLQVHEEGADLSWITYDNEDARSVIPALMH NMGQLEYQGCWARCWVDLGTSDAVALDVLINALQQIDSDVVQLDEVLIGGVNDDWPVEPHPDSIFPVEA
Sequences:
>Translated_149_residues MDVRFREVDPFNCWLWLHFADVPSQGEQNYVDGIFDSWYVIGRLGGFNAENLQVHEEGADLSWITYDNEDARSVIPALMH NMGQLEYQGCWARCWVDLGTSDAVALDVLINALQQIDSDVVQLDEVLIGGVNDDWPVEPHPDSIFPVEA >Mature_149_residues MDVRFREVDPFNCWLWLHFADVPSQGEQNYVDGIFDSWYVIGRLGGFNAENLQVHEEGADLSWITYDNEDARSVIPALMH NMGQLEYQGCWARCWVDLGTSDAVALDVLINALQQIDSDVVQLDEVLIGGVNDDWPVEPHPDSIFPVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16868; Mature: 16868
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVRFREVDPFNCWLWLHFADVPSQGEQNYVDGIFDSWYVIGRLGGFNAENLQVHEEGAD CCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHEEEEECCCCCCCCEEEECCCCC LSWITYDNEDARSVIPALMHNMGQLEYQGCWARCWVDLGTSDAVALDVLINALQQIDSDV EEEEEECCCCHHHHHHHHHHHCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH VQLDEVLIGGVNDDWPVEPHPDSIFPVEA HHHHHHHCCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure MDVRFREVDPFNCWLWLHFADVPSQGEQNYVDGIFDSWYVIGRLGGFNAENLQVHEEGAD CCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHEEEEECCCCCCCCEEEECCCCC LSWITYDNEDARSVIPALMHNMGQLEYQGCWARCWVDLGTSDAVALDVLINALQQIDSDV EEEEEECCCCHHHHHHHHHHHCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH VQLDEVLIGGVNDDWPVEPHPDSIFPVEA HHHHHHHCCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA