| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is ispG
Identifier: 33863049
GI number: 33863049
Start: 851774
End: 852994
Strand: Reverse
Name: ispG
Synonym: PMT0777
Alternate gene names: 33863049
Gene position: 852994-851774 (Counterclockwise)
Preceding gene: 33863050
Following gene: 33863048
Centisome position: 35.38
GC content: 49.71
Gene sequence:
>1221_bases ATGAGTGCAACCATGGCTGAGTATCAATCCAGCACATCCAGGAGATACGACACCCAGATCCACCGACGTGTAACGCGCAC TGTCAACGTAGGAGGTGTCTTGATCGGTAGTGATCATCCTGTCAGGGTGCAGTCGATGATCAACGAGGACACCCTTGACG TGGAGGGGGCAACAGCAGGCATACGACGCTTGCATGAAGCTGGTTGTGAAATTGTTCGTCTAACTGTTCCATCTCTCGGT CATGCCAAGGCCGTCGGCGAGATTTGTCAACGGCTTAGGGAGACCTATCAACCGGTACCCCTTGTGGCTGATGTCCATCA CAACGGCATGAAAATTGCCCTTGAGGTGGCAAACCATGTCGACAAGGTGAGGATCAATCCTGGCCTTTTTGTGTTTGATA AAGCTGATCCAGATCGAACCGAGTTCAGCGGCGAAGAGATTGCTTCTATCAGAGAACGCATTGCCGAGAATTTTGAACCG CTTGTCACTCGTCTCAAGCAGCAAGACAAAGCCCTTCGTATTGGCGTGAATCATGGTTCGCTTGCTGAACGCATGCTCTT TGCCTATGGAGATACTCCTCTTGGCATGGTTGAGTCAGCAATGGAATTCGTGCGAATTTGCGATTCGCTCGATTTTCATA ACATCGTGATTTCGATGAAGGCCTCTAGAGCGCCTGTGATGTTGGCGGCTTATCGATTGATGGCTGACACGATGGATCAA GAGGGTTTCAATTATCCCCTTCATTTGGGCGTAACCGAGGCTGGTGATGGGGATTATGGAAGGATTAAAAGTACAGCGGG CATCGCAACGCTTTTAGCAGAAGGTCTAGGCGATACCATCCGAGTTTCATTGACCGAGGCGCCTGAGAAAGAAATTCCAG TTTGTTACTCGATTCTTCAATCCATCGGGCTGCGCAAAACGATGGTCGAGTACATCAGCTGCCCAAGTTGTGGCCGAACA TTGTTCAACCTTGAAGAGGTTGTTCAGAAAGTGCGCGATTCCACATCCCATCTTGTTGGTTTGGATATTGCGGTAATGGG TTGCATTGTGAATGGTCCAGGTGAGATGGCAGATGCTGACTATGGTTATGTTGGTAAAGGCCCAGGAGTCATATCCCTCT ATCGGGGTAGAGATGAGATTCGCAAGGTTTCTGAGTCTGAGGGTGTAGATGCGTTGATCCAGTTGATTAAGGATGACGGT CGATGGGTGGATCCGCCATGA
Upstream 100 bases:
>100_bases CCCTCACCAGAGGCGATCTGCTCGAGGTCCGCCAAAGGCTCATACAAGTCAATAGGAACGCTGTTGTGCCAATGTTGGAT TCATCTAGGCGCCGTCTGCC
Downstream 100 bases:
>100_bases AGTCGTTATTGTGTGAGATCAGTCCAATTTGGACGCTATGCCCATCTCTAGAAGTCTTCGCTCATTAGGCCGCCAGCGCA GTTCATGGCTGGTCCTTCTG
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSATMAEYQSSTSRRYDTQIHRRVTRTVNVGGVLIGSDHPVRVQSMINEDTLDVEGATAGIRRLHEAGCEIVRLTVPSLG HAKAVGEICQRLRETYQPVPLVADVHHNGMKIALEVANHVDKVRINPGLFVFDKADPDRTEFSGEEIASIRERIAENFEP LVTRLKQQDKALRIGVNHGSLAERMLFAYGDTPLGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDQ EGFNYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSIGLRKTMVEYISCPSCGRT LFNLEEVVQKVRDSTSHLVGLDIAVMGCIVNGPGEMADADYGYVGKGPGVISLYRGRDEIRKVSESEGVDALIQLIKDDG RWVDPP
Sequences:
>Translated_406_residues MSATMAEYQSSTSRRYDTQIHRRVTRTVNVGGVLIGSDHPVRVQSMINEDTLDVEGATAGIRRLHEAGCEIVRLTVPSLG HAKAVGEICQRLRETYQPVPLVADVHHNGMKIALEVANHVDKVRINPGLFVFDKADPDRTEFSGEEIASIRERIAENFEP LVTRLKQQDKALRIGVNHGSLAERMLFAYGDTPLGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDQ EGFNYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSIGLRKTMVEYISCPSCGRT LFNLEEVVQKVRDSTSHLVGLDIAVMGCIVNGPGEMADADYGYVGKGPGVISLYRGRDEIRKVSESEGVDALIQLIKDDG RWVDPP >Mature_405_residues SATMAEYQSSTSRRYDTQIHRRVTRTVNVGGVLIGSDHPVRVQSMINEDTLDVEGATAGIRRLHEAGCEIVRLTVPSLGH AKAVGEICQRLRETYQPVPLVADVHHNGMKIALEVANHVDKVRINPGLFVFDKADPDRTEFSGEEIASIRERIAENFEPL VTRLKQQDKALRIGVNHGSLAERMLFAYGDTPLGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDQE GFNYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSIGLRKTMVEYISCPSCGRTL FNLEEVVQKVRDSTSHLVGLDIAVMGCIVNGPGEMADADYGYVGKGPGVISLYRGRDEIRKVSESEGVDALIQLIKDDGR WVDPP
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family
Homologues:
Organism=Escherichia coli, GI1788863, Length=396, Percent_Identity=36.6161616161616, Blast_Score=213, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ISPG_PROMM (Q7V7G9)
Other databases:
- EMBL: BX548175 - RefSeq: NP_894609.1 - ProteinModelPortal: Q7V7G9 - SMR: Q7V7G9 - STRING: Q7V7G9 - GeneID: 1728361 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT0777 - NMPDR: fig|74547.1.peg.776 - eggNOG: COG0821 - HOGENOM: HBG335271 - OMA: APIVVQS - ProtClustDB: PRK00366 - BioCyc: PMAR74547:PMT0777-MONOMER - HAMAP: MF_00159 - InterPro: IPR016425 - InterPro: IPR004588 - PIRSF: PIRSF004640 - TIGRFAMs: TIGR00612
Pfam domain/function: PF04551 GcpE
EC number: =1.17.7.1
Molecular weight: Translated: 44559; Mature: 44427
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATMAEYQSSTSRRYDTQIHRRVTRTVNVGGVLIGSDHPVRVQSMINEDTLDVEGATAG CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCHHHHHHCCCCCCCCCHHHH IRRLHEAGCEIVRLTVPSLGHAKAVGEICQRLRETYQPVPLVADVHHNGMKIALEVANHV HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEHHCC DKVRINPGLFVFDKADPDRTEFSGEEIASIRERIAENFEPLVTRLKQQDKALRIGVNHGS CEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCH LAERMLFAYGDTPLGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDQ HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCC EGFNYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQ CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHH SIGLRKTMVEYISCPSCGRTLFNLEEVVQKVRDSTSHLVGLDIAVMGCIVNGPGEMADAD HHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHEEHHHHHHEEEEECCCCCCCCCC YGYVGKGPGVISLYRGRDEIRKVSESEGVDALIQLIKDDGRWVDPP CCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SATMAEYQSSTSRRYDTQIHRRVTRTVNVGGVLIGSDHPVRVQSMINEDTLDVEGATAG CCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCHHHHHHCCCCCCCCCHHHH IRRLHEAGCEIVRLTVPSLGHAKAVGEICQRLRETYQPVPLVADVHHNGMKIALEVANHV HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEHHCC DKVRINPGLFVFDKADPDRTEFSGEEIASIRERIAENFEPLVTRLKQQDKALRIGVNHGS CEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCH LAERMLFAYGDTPLGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDQ HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCC EGFNYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQ CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHH SIGLRKTMVEYISCPSCGRTLFNLEEVVQKVRDSTSHLVGLDIAVMGCIVNGPGEMADAD HHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHEEHHHHHHEEEEECCCCCCCCCC YGYVGKGPGVISLYRGRDEIRKVSESEGVDALIQLIKDDGRWVDPP CCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642