| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863017
Identifier: 33863017
GI number: 33863017
Start: 814774
End: 815397
Strand: Reverse
Name: 33863017
Synonym: PMT0745
Alternate gene names: NA
Gene position: 815397-814774 (Counterclockwise)
Preceding gene: 33863025
Following gene: 33863014
Centisome position: 33.82
GC content: 45.67
Gene sequence:
>624_bases ATGCGACCAGTTGCGCTTATTTCCCTGATTGCTGGGCTGTTGACCCTGTCTTTGGCAGTATTTAATGCTTTGACAGTGGA CCTTGTTACGCCGAGCTTTCAGCGTGCTGAGGTCCTGGCTGGCGTTGCCGCCGTGGGGTTGATGCTTATGGCAGTGTTAT GGACACAAGCGAGCCCGATGGCTCCCAGTAAGCAGATCCTTGAGGGAAATCAGAGATTCGAATTAGTAGATGGATTGAAC GATGAATTACAAAAAGAACTTGCCTGGGGAAGTCATTTATTACTTACAGCAACCCCAGCGGCAGTGATCCTAGTGTATTG GAATAATCAGGTTCTTTTACGTCGAGGAATAAGTGGTAATGGTAAATTCGTTCCAGGTGAAATCTGTAGACAGGCTAGAG ATCGAGGCGAATTGATTTCATTAGTTAACACATCATTGTTTCCTGGGAGAATCGAATTTAATCCAATTATTGAGAACTTG CCTGCTGTCATGGTCTATCCATTAGCATCTAATGGATGGGTTGTTCTGGGGGGATGTTCCGAGCGATGTTTTAGTCGTTC AGATGAACTCTGGTTGATTGGATGGTCGCAACGTCTTAGAACTGAATTGGAGGAGAGGACTTAG
Upstream 100 bases:
>100_bases GCCACTGCTGCAAAGGCTTCAGCGTCGGTCATGAAAGCTGGAACAACACAACCCATTTGAGCAAGAGTGCCTGCATCTGA CATCGCTTTTGTTTCGTTCG
Downstream 100 bases:
>100_bases AGGAAAGGATCGATTTTTCCTTGCCTGCTTCAATTGTTAGTTGTGATCTCACTTTAGAATCAGATGACGAGAAAGATACT GTTCCCTCTTCTCCAATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MRPVALISLIAGLLTLSLAVFNALTVDLVTPSFQRAEVLAGVAAVGLMLMAVLWTQASPMAPSKQILEGNQRFELVDGLN DELQKELAWGSHLLLTATPAAVILVYWNNQVLLRRGISGNGKFVPGEICRQARDRGELISLVNTSLFPGRIEFNPIIENL PAVMVYPLASNGWVVLGGCSERCFSRSDELWLIGWSQRLRTELEERT
Sequences:
>Translated_207_residues MRPVALISLIAGLLTLSLAVFNALTVDLVTPSFQRAEVLAGVAAVGLMLMAVLWTQASPMAPSKQILEGNQRFELVDGLN DELQKELAWGSHLLLTATPAAVILVYWNNQVLLRRGISGNGKFVPGEICRQARDRGELISLVNTSLFPGRIEFNPIIENL PAVMVYPLASNGWVVLGGCSERCFSRSDELWLIGWSQRLRTELEERT >Mature_207_residues MRPVALISLIAGLLTLSLAVFNALTVDLVTPSFQRAEVLAGVAAVGLMLMAVLWTQASPMAPSKQILEGNQRFELVDGLN DELQKELAWGSHLLLTATPAAVILVYWNNQVLLRRGISGNGKFVPGEICRQARDRGELISLVNTSLFPGRIEFNPIIENL PAVMVYPLASNGWVVLGGCSERCFSRSDELWLIGWSQRLRTELEERT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22771; Mature: 22771
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVALISLIAGLLTLSLAVFNALTVDLVTPSFQRAEVLAGVAAVGLMLMAVLWTQASPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC APSKQILEGNQRFELVDGLNDELQKELAWGSHLLLTATPAAVILVYWNNQVLLRRGISGN CCCHHHHCCCCCEEHHCCCCHHHHHHHHCCCEEEEEECCEEEEEEEECCEEEEEECCCCC GKFVPGEICRQARDRGELISLVNTSLFPGRIEFNPIIENLPAVMVYPLASNGWVVLGGCS CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCEEEEEEECCCCEEEEECCC ERCFSRSDELWLIGWSQRLRTELEERT HHHCCCCCCEEEEECHHHHHHHHHHCC >Mature Secondary Structure MRPVALISLIAGLLTLSLAVFNALTVDLVTPSFQRAEVLAGVAAVGLMLMAVLWTQASPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC APSKQILEGNQRFELVDGLNDELQKELAWGSHLLLTATPAAVILVYWNNQVLLRRGISGN CCCHHHHCCCCCEEHHCCCCHHHHHHHHCCCEEEEEECCEEEEEEEECCEEEEEECCCCC GKFVPGEICRQARDRGELISLVNTSLFPGRIEFNPIIENLPAVMVYPLASNGWVVLGGCS CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCEEEEEEECCCCEEEEECCC ERCFSRSDELWLIGWSQRLRTELEERT HHHCCCCCCEEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA