| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863014
Identifier: 33863014
GI number: 33863014
Start: 809605
End: 811410
Strand: Reverse
Name: 33863014
Synonym: PMT0742
Alternate gene names: NA
Gene position: 811410-809605 (Counterclockwise)
Preceding gene: 33863017
Following gene: 33863010
Centisome position: 33.66
GC content: 48.23
Gene sequence:
>1806_bases GTGTCTGCGAACAAAATTTTTTCCACTACTCAGGTGCCCTTGGTGGTCTGGGGTGGAGGCACAGGAGGCGTCGCCTCAGC CGTGCAAGCTGCTCGACATGGAATTAGAACTCTGCTGTTAACACCAGGCGCGTGGCTTGGTGGAATGATCAGTGCAGCTG GCGTTTCGGCTCCAGACGGCCATGAACTCAGTTGCTGGCAGACAGGCTTGTGGGGGGCCTTCCTTCAAGACATCGCCAAA GTTGAACAGGATGGCCTGGATCAGAACTGGGTGAGTTGCTTTGGTTTTAATCCCGCTCGCGCAGAAGTGGTTTTGCGGAG CTGGGTTGTAGATCTCCCCAATCTCGAATGGTGGTCTGACGTTCAGCTTAAATCAATTTTTCGTGAGGGAGATCGCCTTG TCTTGCTTGAGCTGGAGCTTGAAGGGCGACAGCATCAACTGCGCTTCGACTTATTCATTGATGGAAGTGATTTAGGCGAC AGCTTTTCCCTCGCAGACATTTCTCACCGTTGGGGTTGGGAATCACAAGAACTCTGGAATGAGCCAAGCGCCCCTTCGGC AAAACAATTGAATTCCGATCCATTCTTTGCCAGCCAGCCTGTTCAATCCCCTACTTGGGTTGTGATGGGTCAACTCGATC AACATGCACAATCACCTTCATCACCAGGGTGCTTGCCTCGACCATTCGAAGCTGCAACTAAGGCGTTTGGTTTTGAGCGC ACCGTTACCTATGGCCGCCTTCCAGGCGGTTTAGTAATGCTCAACTGGCCCCTTCATGGAAACGACTGGCATAAAGGCTT GGAGCGTATTCGCAGCTCAGACGTCAAAATTAAAAACCAGCTTGCTGTTGAAATGCAGCTTTATAGCTTGTCATTCCTAC AGGCTCTTCAAACAGTTAGTGAGGGTTGGCTTAATCCTGGCAAGGTGTTTCCAGGGATCAATCAAAGCCTGGCATTGATG CCCTACTGGCGTGAAGGGCGACGCCTTAAAGGTCAATACACATTAGTGGAAGGAGATCTTCTGCCATTAGCCTCTGGAGC AGCCAGAGGACCAATCCCTTTAGATAAACAGGGACGTTGCACCAGTATTGCTGTAGGGACTTACGCTAATGATCATCATT ATCCTGGTAAGGATTGGCCGTTAGCCTCAAAAAGTTGTAGATGGGGTGGGAGATGGACAGGTACTCCATTCTGCATTCCT TACGGGGCTCTACTTAGTAGCGAAGTGGAGAATATTCTGATGGCTGATAAGGCCTTTAGTGTGAGTCATATAGCTAATGG TGCAACTCGATTACAGCCAATGATTTTCAATCTTGGTCAGGCTGCTGGAATGGCAGCAGCTATAGCCTTGAAAAAGAGGA TTCAACCAGCAGAAGTTGATATTTCAGAACTACAGCATGAACTATTGCATGATATTTATGCCCCAGCAGCTATTGTTCCG ATTTGGGATTGGCCGGCATGGCATCCTCACTGGCGTAATGCTCAGAAATTTGTTTTGGCGCAACCAGACTGCCTCAGCAA CCATAGTTTGATTGAAGGCTTTAATCTTAAAGCAAATGTAGGAGAAATGCCACTGCCAGATCAAACACCACTCAATAAAC ATGTGAAAAAGTTTTCAGGTTGCCTTCGTGTTCATTCTGATCAGACATTCTCTCTAGACACCAAGTCTAAATCATGGCGA TTAATAACACTGGAGCCGGCATTAAACCGGTGGCTAGAATCATGTGAAGACCAGCAGAATGTACACCTTCTAGCAGTTGC TAATCCATGGGGACCATGGCTGAGGTTGATTCGCGTTTTAGATTAA
Upstream 100 bases:
>100_bases TCTATGAACAATTTGTTGCGCTTCGCCAGCGTTGTCTAAGCAACCTTTGTCATGAAGCTGAATTGCTTTCTGGCAAAGAT GATTATGTTTTGGGATGACA
Downstream 100 bases:
>100_bases TAACAGCTTTTGGTAGTTTGTTTGTTTCTATGATTTGAGAAGCTACTTGGCGACCAGCTCAATCTGATCAGTCAATGGAT CAATAACAAGAACTCTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MSANKIFSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMISAAGVSAPDGHELSCWQTGLWGAFLQDIAK VEQDGLDQNWVSCFGFNPARAEVVLRSWVVDLPNLEWWSDVQLKSIFREGDRLVLLELELEGRQHQLRFDLFIDGSDLGD SFSLADISHRWGWESQELWNEPSAPSAKQLNSDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEAATKAFGFER TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAVEMQLYSLSFLQALQTVSEGWLNPGKVFPGINQSLALM PYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRCTSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIP YGALLSSEVENILMADKAFSVSHIANGATRLQPMIFNLGQAAGMAAAIALKKRIQPAEVDISELQHELLHDIYAPAAIVP IWDWPAWHPHWRNAQKFVLAQPDCLSNHSLIEGFNLKANVGEMPLPDQTPLNKHVKKFSGCLRVHSDQTFSLDTKSKSWR LITLEPALNRWLESCEDQQNVHLLAVANPWGPWLRLIRVLD
Sequences:
>Translated_601_residues MSANKIFSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMISAAGVSAPDGHELSCWQTGLWGAFLQDIAK VEQDGLDQNWVSCFGFNPARAEVVLRSWVVDLPNLEWWSDVQLKSIFREGDRLVLLELELEGRQHQLRFDLFIDGSDLGD SFSLADISHRWGWESQELWNEPSAPSAKQLNSDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEAATKAFGFER TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAVEMQLYSLSFLQALQTVSEGWLNPGKVFPGINQSLALM PYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRCTSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIP YGALLSSEVENILMADKAFSVSHIANGATRLQPMIFNLGQAAGMAAAIALKKRIQPAEVDISELQHELLHDIYAPAAIVP IWDWPAWHPHWRNAQKFVLAQPDCLSNHSLIEGFNLKANVGEMPLPDQTPLNKHVKKFSGCLRVHSDQTFSLDTKSKSWR LITLEPALNRWLESCEDQQNVHLLAVANPWGPWLRLIRVLD >Mature_600_residues SANKIFSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMISAAGVSAPDGHELSCWQTGLWGAFLQDIAKV EQDGLDQNWVSCFGFNPARAEVVLRSWVVDLPNLEWWSDVQLKSIFREGDRLVLLELELEGRQHQLRFDLFIDGSDLGDS FSLADISHRWGWESQELWNEPSAPSAKQLNSDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEAATKAFGFERT VTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAVEMQLYSLSFLQALQTVSEGWLNPGKVFPGINQSLALMP YWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRCTSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIPY GALLSSEVENILMADKAFSVSHIANGATRLQPMIFNLGQAAGMAAAIALKKRIQPAEVDISELQHELLHDIYAPAAIVPI WDWPAWHPHWRNAQKFVLAQPDCLSNHSLIEGFNLKANVGEMPLPDQTPLNKHVKKFSGCLRVHSDQTFSLDTKSKSWRL ITLEPALNRWLESCEDQQNVHLLAVANPWGPWLRLIRVLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66707; Mature: 66575
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANKIFSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMISAAGVSAPDG CCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCC HELSCWQTGLWGAFLQDIAKVEQDGLDQNWVSCFGFNPARAEVVLRSWVVDLPNLEWWSD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCC VQLKSIFREGDRLVLLELELEGRQHQLRFDLFIDGSDLGDSFSLADISHRWGWESQELWN HHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEHHHHHHCCCCCHHHCC EPSAPSAKQLNSDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEAATKAFGFER CCCCCCHHHCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCHHHHHHHCCCHH TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAVEMQLYSLSFLQALQTVS EEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCEEEEHHHHHHHHHHHHHHHH EGWLNPGKVFPGINQSLALMPYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRC HCCCCCCCCCCCCCCCEEECCCCCCCCEECCEEEEEECCCEECCCCCCCCCCCCCCCCCE TSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIPYGALLSSEVENILMADKAFS EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC VSHIANGATRLQPMIFNLGQAAGMAAAIALKKRIQPAEVDISELQHELLHDIYAPAAIVP HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEE IWDWPAWHPHWRNAQKFVLAQPDCLSNHSLIEGFNLKANVGEMPLPDQTPLNKHVKKFSG ECCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH CLRVHSDQTFSLDTKSKSWRLITLEPALNRWLESCEDQQNVHLLAVANPWGPWLRLIRVL HEEECCCCEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHC D C >Mature Secondary Structure SANKIFSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMISAAGVSAPDG CCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCC HELSCWQTGLWGAFLQDIAKVEQDGLDQNWVSCFGFNPARAEVVLRSWVVDLPNLEWWSD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCC VQLKSIFREGDRLVLLELELEGRQHQLRFDLFIDGSDLGDSFSLADISHRWGWESQELWN HHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEHHHHHHCCCCCHHHCC EPSAPSAKQLNSDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEAATKAFGFER CCCCCCHHHCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCHHHHHHHCCCHH TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAVEMQLYSLSFLQALQTVS EEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCEEEEHHHHHHHHHHHHHHHH EGWLNPGKVFPGINQSLALMPYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRC HCCCCCCCCCCCCCCCEEECCCCCCCCEECCEEEEEECCCEECCCCCCCCCCCCCCCCCE TSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIPYGALLSSEVENILMADKAFS EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC VSHIANGATRLQPMIFNLGQAAGMAAAIALKKRIQPAEVDISELQHELLHDIYAPAAIVP HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEE IWDWPAWHPHWRNAQKFVLAQPDCLSNHSLIEGFNLKANVGEMPLPDQTPLNKHVKKFSG ECCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH CLRVHSDQTFSLDTKSKSWRLITLEPALNRWLESCEDQQNVHLLAVANPWGPWLRLIRVL HEEECCCCEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA