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The map label for this gene is 33862897

Identifier: 33862897

GI number: 33862897

Start: 678229

End: 678609

Strand: Reverse

Name: 33862897

Synonym: PMT0624

Alternate gene names: NA

Gene position: 678609-678229 (Counterclockwise)

Preceding gene: 33862901

Following gene: 33862896

Centisome position: 28.15

GC content: 50.39

Gene sequence:

>381_bases
ATGATGGATTCAACCGGGATGGGGTGTTGGGGCGAAGAGCGGGTGTTACGCCTCCTACAAAAACGCGGATGGCAGTTGGT
GAGCCAACGTTGGTCATGTCGCTATGGCGAGTTAGATCTTGTAGTTGAGAAGCAGCAACGGGTGCTGGTTGTGGAAGTGA
AGTCTCGTCGTTCTCGTGGATTAGATCATTGGGGATTGTGTGCCTTTAACAAAGGAAAGCAGCTGCGATTGATGCGTGCG
ATTGGATGTTGGCTGGCAACTCATCCTTACTTCGCTGAACACAGCTTGGAGTTGGTGATGGCTTTGGTGCCCTTACCGCC
GAGTCAAAACACACTCGATTGGATTCGAATTGACGACCTTGACATTGATGCTGCTGATTAA

Upstream 100 bases:

>100_bases
TCATTCTCTTGAACTTTTCGCGTTGAATTCATACGTGCTGCTTTGTGTATTGGTACAGCATCGATGCATGGGTGGAATTC
TCATGTGAATGCAGCAGCAA

Downstream 100 bases:

>100_bases
AGCAACTGTATTCTTCATCTCTTGAAGACAGATTGCTGACAGTTCCTTAAATTCCTCAACTGTTTGCTATGCGGATAAAA
TGCATCATAAAACTGGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MMDSTGMGCWGEERVLRLLQKRGWQLVSQRWSCRYGELDLVVEKQQRVLVVEVKSRRSRGLDHWGLCAFNKGKQLRLMRA
IGCWLATHPYFAEHSLELVMALVPLPPSQNTLDWIRIDDLDIDAAD

Sequences:

>Translated_126_residues
MMDSTGMGCWGEERVLRLLQKRGWQLVSQRWSCRYGELDLVVEKQQRVLVVEVKSRRSRGLDHWGLCAFNKGKQLRLMRA
IGCWLATHPYFAEHSLELVMALVPLPPSQNTLDWIRIDDLDIDAAD
>Mature_126_residues
MMDSTGMGCWGEERVLRLLQKRGWQLVSQRWSCRYGELDLVVEKQQRVLVVEVKSRRSRGLDHWGLCAFNKGKQLRLMRA
IGCWLATHPYFAEHSLELVMALVPLPPSQNTLDWIRIDDLDIDAAD

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14609; Mature: 14609

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDSTGMGCWGEERVLRLLQKRGWQLVSQRWSCRYGELDLVVEKQQRVLVVEVKSRRSRG
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCHHHCC
LDHWGLCAFNKGKQLRLMRAIGCWLATHPYFAEHSLELVMALVPLPPSQNTLDWIRIDDL
CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCCEEEEEECCC
DIDAAD
CCCCCC
>Mature Secondary Structure
MMDSTGMGCWGEERVLRLLQKRGWQLVSQRWSCRYGELDLVVEKQQRVLVVEVKSRRSRG
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCHHHCC
LDHWGLCAFNKGKQLRLMRAIGCWLATHPYFAEHSLELVMALVPLPPSQNTLDWIRIDDL
CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCCEEEEEECCC
DIDAAD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA