| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yrrI [H]
Identifier: 33862875
GI number: 33862875
Start: 659832
End: 660833
Strand: Reverse
Name: yrrI [H]
Synonym: PMT0602
Alternate gene names: 33862875
Gene position: 660833-659832 (Counterclockwise)
Preceding gene: 33862876
Following gene: 33862873
Centisome position: 27.41
GC content: 55.79
Gene sequence:
>1002_bases ATGAATGCCCGCACCCTTCTTGTCGCACTCACTCTGGTGGTGCTGGCTTTGCTCACCTGGCAGCTGCGTTGGGTGTTGTT AGTGCTCTTTGGAGCAGTGGTATTAGCAGTAGCACTTGATGTGCTAATTGAGAAACTTCAGGACCGCCTCTCCTGGCCTC GTCCCCTTTCGCTAGCAGTGGTGCTGGTGGTGCTGCTGCTTGGCGGTGCCTTGGTTTTCCAGCTGCTGGTGCCTGAGTTG ATCACCCAGGTTCAAGAGTTGGGCAACCTCGTACCCACCCTGGTGAGCAAGCTGAAATCGATGCTGGTCAGCAACCCGCG ACTGATGAATCTGGAAGAGTCTTTTGCCGAACAGTTCAGCTGGGATCGGATCCAACCCTTGGGCTCGCAATTGCTTGGCG TGGCAGGCGGGGCCGCCAACAGCCTGATTCAGTTGTTGTTGATGAGCCTGCTGGCTGTCTTGCTAGCGCTAGACCCTGTA TCCCATCGCCAAATGGTGATTGCTGCAACGCCTCGGCCTGCGCGACAGGAGATGGCTGAATTGCTTGATCAATGCCGTTT GGCTCTTGGTGGCTGGCTTGCTGGGATGACGATCTCAGCCAGCAGCGTGTTTGTGCTCACTTGGGCAGGGCTTGCACTGC TCAAGGTTCCTCTGGCCCTATTGAGTGCATTGGTCTGTGGCTTGCTGACCTTCGTCCCCACCATTGGGCCAACGGCCGCC TCACTGCTGCCATTGGCCATGGCCCTGCTTGTTTCACCCCTACTAATGCTGCAAGTTCTGCTATTGCGGCTGATTTTGCA GAATCTTGAGGCGTTTTTGCTCACCCCGCTGTTATTGCGGCGTACGGTCAACCTGCTTCCCACCGTGGCGTTAATGGCTC AACTGAGCTTGGGCGCCTTATTGGGTCTACCAGGGGTGTTGTTGGCTTTGCCACTTGTGGTGGTTTTGCAGGTAGGAATG GAGCAGGTGGTTGTTAAACAGATCATGGATCGTTGGGCGTAA
Upstream 100 bases:
>100_bases TGCTGTTGGCGCTGCCACTCGCTGTCGTGCTGCAAGTGTTGATTCGCGAGGTGGTCATCCACGATTTGCTTGATCCCTGG AAGAAAAAGCGATTGGCGCC
Downstream 100 bases:
>100_bases TCATCCAACAATATTCGCTTGATATGAGGCTGTCATTTATTGATGATTGGCAACAAATCAATCACGACTGCAACTTCATG CTGGACGATTTTATGTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAVVLVVLLLGGALVFQLLVPEL ITQVQELGNLVPTLVSKLKSMLVSNPRLMNLEESFAEQFSWDRIQPLGSQLLGVAGGAANSLIQLLLMSLLAVLLALDPV SHRQMVIAATPRPARQEMAELLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA SLLPLAMALLVSPLLMLQVLLLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGALLGLPGVLLALPLVVVLQVGM EQVVVKQIMDRWA
Sequences:
>Translated_333_residues MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAVVLVVLLLGGALVFQLLVPEL ITQVQELGNLVPTLVSKLKSMLVSNPRLMNLEESFAEQFSWDRIQPLGSQLLGVAGGAANSLIQLLLMSLLAVLLALDPV SHRQMVIAATPRPARQEMAELLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA SLLPLAMALLVSPLLMLQVLLLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGALLGLPGVLLALPLVVVLQVGM EQVVVKQIMDRWA >Mature_333_residues MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAVVLVVLLLGGALVFQLLVPEL ITQVQELGNLVPTLVSKLKSMLVSNPRLMNLEESFAEQFSWDRIQPLGSQLLGVAGGAANSLIQLLLMSLLAVLLALDPV SHRQMVIAATPRPARQEMAELLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA SLLPLAMALLVSPLLMLQVLLLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGALLGLPGVLLALPLVVVLQVGM EQVVVKQIMDRWA
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 35825; Mature: 35825
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VLVVLLLGGALVFQLLVPELITQVQELGNLVPTLVSKLKSMLVSNPRLMNLEESFAEQFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC WDRIQPLGSQLLGVAGGAANSLIQLLLMSLLAVLLALDPVSHRQMVIAATPRPARQEMAE CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH LLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SLLPLAMALLVSPLLMLQVLLLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLPGVLLALPLVVVLQVGMEQVVVKQIMDRWA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VLVVLLLGGALVFQLLVPELITQVQELGNLVPTLVSKLKSMLVSNPRLMNLEESFAEQFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC WDRIQPLGSQLLGVAGGAANSLIQLLLMSLLAVLLALDPVSHRQMVIAATPRPARQEMAE CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH LLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SLLPLAMALLVSPLLMLQVLLLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLPGVLLALPLVVVLQVGMEQVVVKQIMDRWA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]