| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862844
Identifier: 33862844
GI number: 33862844
Start: 625443
End: 626654
Strand: Reverse
Name: 33862844
Synonym: PMT0571
Alternate gene names: NA
Gene position: 626654-625443 (Counterclockwise)
Preceding gene: 33862845
Following gene: 33862843
Centisome position: 25.99
GC content: 47.03
Gene sequence:
>1212_bases TTGAGCAAATGGCGCCTTGGAAAGTTGAAAGACGTTGATTCTTGGCCTTGGAAGTGGTGGCGCTGGGCTTCATCCAAGTG GAGGCTTATCCCGCTGCTGGATCGATGGCTTTTAGGTGAGTTGATACCCGTATTGCTGTTTGCCATAGCGGCCTTCACGG TGGTTTCCGTCTCAGTGGGGGTGATGTTTGATTTGGTGCGCAAGATTGTTGAGTTTGGATTGCCTCTACATTTTGCATTG CAGGTTTTTAGCTTGAAATTACCTTTCTTTCTGGTGATTTCTTTTCCGATGGCCACATTGTTGGCCACCTTGTTGGCTTA TAGCCGTCTTTCTTCTAACAGCGAATTCACGGCTTTGCGCAGCCTCGGTGTAAGCACCAGACGAATCGTTGCTCCAGCAT TGGCATTGGCATTATTGATGACAGGGCTAACTTTTATCTTCAATGATGTCATTGTTCCAAGAACAAATAGTAGTGCTGAG GTGACAATAAAGCGTGCTCTTGGCAAAGCTATTGCTACAGAGAAAGGTAAACATGTTGTTTATTCCCGATTTGGAACGAT TACTGGTGCAGAAGCTGAAGATTGGAATCAAGGGCTTTCTCAGTTGTTTTATGCAAGGGAATTCCTTAAGGGAGAAATGG AGGATGTCACAGTGCTTGATTTGTCTCGTCTTGGTTTTACTCAGATGTTGAAGGCCGAGCGGGCTATTTGGAATGAGCAG GAGGCGATGTGGGAATTTTTTAACGGAAATATTCTTACTCTCACACCAAGGGGTAGTACCACTTCGGTTGAATTTGATCG CTATCTCTACCCCCTAACATCAGGCCCAATTCGTGTGGCCAAACTCCCTAAAGATGCCAACAACATGACTGTTGCACAGG CCATGGAGGCTGCAAGTATTTATACCGATGCTGGTAACCGTAAAGAGGCAAGGCGTTTGAAGGTGCGTATCCAAGAAAAA TTCACTTTCCCGATGTCCTGCCTGGTGTTTGGCCTGATTGGCAGCAGCCTTGGTGCAAAACCTAATTCTCGGACCAGCCG GACCCAGGGATTTGGCATCAGTCTCTTATTAATTCTTGCTTATTACACGCTTAGCTTCAGCTTCAGTTCTCTTGGAGTTA CGGGCACTTTGACACCGATGTTGGCCGCGTGGATCCCTGTTTTTATCTCTTTGGCAGGTGGCGGTCTGTTGCTGCGTCAG GCCAGTCGTTGA
Upstream 100 bases:
>100_bases ACATTCTTACGGAAGGCAGCATTCTTGCTTCAGGCCGTTCTGAAGAAGTGGCAAACAACCTCTTGGTGCGGCGTCACTAT CTCGGGGAGGGTTTTCAGCT
Downstream 100 bases:
>100_bases ACTGCAGCGGCAGAATAAGAGAGTTGTCGCAGGGACCTGGTGTTTGGAGTGACGTTGGCTGAGCTTTCCGCCTCGCTAGG GGATCCTGTTTTGGCTCTTG
Product: permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFAL QVFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAE VTIKRALGKAIATEKGKHVVYSRFGTITGAEAEDWNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQ EAMWEFFNGNILTLTPRGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEK FTFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWIPVFISLAGGGLLLRQ ASR
Sequences:
>Translated_403_residues MSKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFAL QVFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAE VTIKRALGKAIATEKGKHVVYSRFGTITGAEAEDWNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQ EAMWEFFNGNILTLTPRGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEK FTFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWIPVFISLAGGGLLLRQ ASR >Mature_402_residues SKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFALQ VFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAEV TIKRALGKAIATEKGKHVVYSRFGTITGAEAEDWNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQE AMWEFFNGNILTLTPRGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEKF TFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWIPVFISLAGGGLLLRQA SR
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44919; Mature: 44788
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVG CCCCCCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMFDLVRKIVEFGLPLHFALQVFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALR HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAEVTIKRALGKAIATEKGKHVV HCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE YSRFGTITGAEAEDWNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQ EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHCHH EAMWEFFNGNILTLTPRGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASI HHHHHHHCCCEEEEECCCCCCEEEHHHEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHH YTDAGNRKEARRLKVRIQEKFTFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILA HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH YYTLSFSFSSLGVTGTLTPMLAAWIPVFISLAGGGLLLRQASR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC >Mature Secondary Structure SKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVG CCCCCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMFDLVRKIVEFGLPLHFALQVFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALR HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAEVTIKRALGKAIATEKGKHVV HCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE YSRFGTITGAEAEDWNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQ EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHCHH EAMWEFFNGNILTLTPRGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASI HHHHHHHCCCEEEEECCCCCCEEEHHHEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHH YTDAGNRKEARRLKVRIQEKFTFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILA HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH YYTLSFSFSSLGVTGTLTPMLAAWIPVFISLAGGGLLLRQASR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA