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The map label for this gene is ccsA [H]

Identifier: 33862843

GI number: 33862843

Start: 624447

End: 625403

Strand: Reverse

Name: ccsA [H]

Synonym: PMT0570

Alternate gene names: 33862843

Gene position: 625403-624447 (Counterclockwise)

Preceding gene: 33862844

Following gene: 33862841

Centisome position: 25.94

GC content: 50.47

Gene sequence:

>957_bases
GTGTTTGGAGTGACGTTGGCTGAGCTTTCCGCCTCGCTAGGGGATCCTGTTTTGGCTCTTGGTTTGGCTGCATTTGCCCT
ACTTCTGTTGGCCATACCAATCTCTTTTTGGATGGTTTCAGGAGGTAGCAATTCTGCTGTTGTGACACTTCTGGTGGCTC
TTGCCAATTTGGTTCTTACCGCTCAATTGGTTTTGCGGTGGTGGCAGTCGGGTCACTTCCCGATCAGCAACCTTTATGAA
TCCCTCTGTTTTCTGGCCTGGGCTTGCACACTTGCGCAGCTATTGGTGGAGCGTTCCTTGTCTTCTCCGATTGTTTCAGC
TGCTGCTACACCAATGGCTTTGCTTTGTGTGGCTTTTGCCAGCTTTGCATTACCAGAAACTCTTCAGGAGGCCTCTCCTC
TAGTACCAGCTCTTCGCTCCAGTTGGCTTGTGATGCACGTGAGCGTGATTATGTGCAGTTACGCTGCCCTGCTTGTTGGT
TCTTTCTTATCAATGGCGGTTCTATTTACTGATCGCCAGCAAACTTTGGAGCTACGCAGCAGTTCAATTGGAACAGGAGG
CTTTCGTCAGGCAAAGCTAGCCACATCTTCTATGGATCAGAGTGATGGCCTGCGCCTGAGTTCAATCAACTTGAGCCGCA
CTGAACAATTGGACAGTCTTAGTTATCGCACGATTACGGTTGGCTTTTTGTTGCTCACGCTTGGCTTGATCAGTGGTGCC
GTTTGGGCCAATGAGGCCTGGGGGAGCTGGTGGAGTTGGGATCCAAAGGAAACCTGGGCTCTAATTTGTTGGATGGTTTA
TGCGGCCTATCTGCATACACGTTTCAGTCGTGGGTGGAGCGGGAGACGTCCGGCTTTAGTTGCCGTGGCAGGCATCGTTG
TGATCGTTGTTTGTTATATCGGTGTGAATCTGTTAGGGATTGGTTTGCACAGCTACGGCTGGTTCTTTGAAGCCTAA

Upstream 100 bases:

>100_bases
GATCCCTGTTTTTATCTCTTTGGCAGGTGGCGGTCTGTTGCTGCGTCAGGCCAGTCGTTGAACTGCAGCGGCAGAATAAG
AGAGTTGTCGCAGGGACCTG

Downstream 100 bases:

>100_bases
TCTTGTGATATTGATCTGTTCTTATTAGCAACAATCCCCACAAGACTAATAGGCAATAGATGCAGTTATTGCTGCATCTA
TTACTTCAGACCACAACACC

Product: heme transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLTAQLVLRWWQSGHFPISNLYE
SLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFASFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVG
SFLSMAVLFTDRQQTLELRSSSIGTGGFRQAKLATSSMDQSDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYIGVNLLGIGLHSYGWFFEA

Sequences:

>Translated_318_residues
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLTAQLVLRWWQSGHFPISNLYE
SLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFASFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVG
SFLSMAVLFTDRQQTLELRSSSIGTGGFRQAKLATSSMDQSDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYIGVNLLGIGLHSYGWFFEA
>Mature_318_residues
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLTAQLVLRWWQSGHFPISNLYE
SLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFASFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVG
SFLSMAVLFTDRQQTLELRSSSIGTGGFRQAKLATSSMDQSDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYIGVNLLGIGLHSYGWFFEA

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 34377; Mature: 34377

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLT
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH
AQLVLRWWQSGHFPISNLYESLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVGSFLSMAVLFTDRQQTLELRS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SSIGTGGFRQAKLATSSMDQSDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
CCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYI
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
GVNLLGIGLHSYGWFFEA
HHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLT
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH
AQLVLRWWQSGHFPISNLYESLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVGSFLSMAVLFTDRQQTLELRS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SSIGTGGFRQAKLATSSMDQSDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
CCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYI
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
GVNLLGIGLHSYGWFFEA
HHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA