| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862813
Identifier: 33862813
GI number: 33862813
Start: 587855
End: 588163
Strand: Reverse
Name: 33862813
Synonym: PMT0540
Alternate gene names: NA
Gene position: 588163-587855 (Counterclockwise)
Preceding gene: 33862814
Following gene: 33862812
Centisome position: 24.4
GC content: 53.72
Gene sequence:
>309_bases TTGAGCTGCGAAGATTTAACAATCCACTTCCTACAGACCGTGCCGCGATTTCATGCCCGCGTTCTTGTCAGTCTGCGTCC TTCAGTGCTTGACCCGGCTGGGGAGGCTGCTCGATCTGCTGCCAATCGCCTTGGGGTGGAAGGCATCAGCAAACTGCGGA TCGGAAAGGTTGTTGATCTTGAGCTCGAGGCTGATAATGAAGCGGAAGCACGCAAGCAGCTGGAACTGCTCAGTGATCGC CTGTTTGCCAATCCCGTGATTGAAGATTGGAGTCTTGAGCTTCAGCCGATTCCTACAACCACCGCTTAA
Upstream 100 bases:
>100_bases TGTTTTGATCGTTGAATCAATCATCACCATTCACCACGCAAGCAGTGCGGGCCTAGTGGCCTAGGTTTTAAACACACTTT CATCCTTTAAAAAGGGTGCC
Downstream 100 bases:
>100_bases TGCAGCCATGAGTATTGGTGTTGTTGTCTTCCCTGGCTCAAATTGTGATCGCGATGTGCGCTGGGCAGCGCAAGGATGCT TGAACATCCCAACGCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSCEDLTIHFLQTVPRFHARVLVSLRPSVLDPAGEAARSAANRLGVEGISKLRIGKVVDLELEADNEAEARKQLELLSDR LFANPVIEDWSLELQPIPTTTA
Sequences:
>Translated_102_residues MSCEDLTIHFLQTVPRFHARVLVSLRPSVLDPAGEAARSAANRLGVEGISKLRIGKVVDLELEADNEAEARKQLELLSDR LFANPVIEDWSLELQPIPTTTA >Mature_101_residues SCEDLTIHFLQTVPRFHARVLVSLRPSVLDPAGEAARSAANRLGVEGISKLRIGKVVDLELEADNEAEARKQLELLSDRL FANPVIEDWSLELQPIPTTTA
Specific function: Unknown
COG id: COG1828
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0062 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003850 - ProDom: PD010362 [H]
Pfam domain/function: PF02700 PurS [H]
EC number: NA
Molecular weight: Translated: 11261; Mature: 11130
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCEDLTIHFLQTVPRFHARVLVSLRPSVLDPAGEAARSAANRLGVEGISKLRIGKVVDL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEE ELEADNEAEARKQLELLSDRLFANPVIEDWSLELQPIPTTTA EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure SCEDLTIHFLQTVPRFHARVLVSLRPSVLDPAGEAARSAANRLGVEGISKLRIGKVVDL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEE ELEADNEAEARKQLELLSDRLFANPVIEDWSLELQPIPTTTA EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]