| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862739
Identifier: 33862739
GI number: 33862739
Start: 518114
End: 518485
Strand: Reverse
Name: 33862739
Synonym: PMT0466
Alternate gene names: NA
Gene position: 518485-518114 (Counterclockwise)
Preceding gene: 33862740
Following gene: 33862738
Centisome position: 21.51
GC content: 47.04
Gene sequence:
>372_bases ATGGGCAAGGAGAGGTTTAAACATATGACGCGTGCCAAGGTCATTCAGCTGGGCTTTCTTGTTTTGATACTCGGGGGGAT CGCTTACAGTGTATTGAGATTTACGGGCCTGGATAGTATTTCTGCCGGTATCGCTGCTCAATCACTTCTTGTTGTGGTTG TTGTCGCCTGGACGGGATCATATCTACTTCGAGTGGTTTCAGGGAATATGACCTTCATGCAACAACGGCGACGTTATCAA CAGGCCTATGAAAATCTATCAGCTGCTGAACTTCAGGCTCGCTTCGATGCATTACCTGATGCTGAGAAAGTTTCCTTACT GAAGGATATTGAGGATGAGAATCCTAAGCAACAAGCCCCCTCTGACCCATAG
Upstream 100 bases:
>100_bases CACTGTATGGGCAAATTCGAGCGTCTAAGCGCCTACGGATTGGTGTTCCTGTTCTTTCCCGGTTTAATTCTATTCGCGCC TTTTTTGAATCTTCGCCTTA
Downstream 100 bases:
>100_bases GTTCTAGGGCGTTTGCCCCCCTCACGCCTTCTTCTAATTGATTGCTATGGCAGATTTCTTGGCACCTAAATCCAATACAC ACGCCACAATCAGCAGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MGKERFKHMTRAKVIQLGFLVLILGGIAYSVLRFTGLDSISAGIAAQSLLVVVVVAWTGSYLLRVVSGNMTFMQQRRRYQ QAYENLSAAELQARFDALPDAEKVSLLKDIEDENPKQQAPSDP
Sequences:
>Translated_123_residues MGKERFKHMTRAKVIQLGFLVLILGGIAYSVLRFTGLDSISAGIAAQSLLVVVVVAWTGSYLLRVVSGNMTFMQQRRRYQ QAYENLSAAELQARFDALPDAEKVSLLKDIEDENPKQQAPSDP >Mature_122_residues GKERFKHMTRAKVIQLGFLVLILGGIAYSVLRFTGLDSISAGIAAQSLLVVVVVAWTGSYLLRVVSGNMTFMQQRRRYQQ AYENLSAAELQARFDALPDAEKVSLLKDIEDENPKQQAPSDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13658; Mature: 13527
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKERFKHMTRAKVIQLGFLVLILGGIAYSVLRFTGLDSISAGIAAQSLLVVVVVAWTGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YLLRVVSGNMTFMQQRRRYQQAYENLSAAELQARFDALPDAEKVSLLKDIEDENPKQQAP HHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC SDP CCC >Mature Secondary Structure GKERFKHMTRAKVIQLGFLVLILGGIAYSVLRFTGLDSISAGIAAQSLLVVVVVAWTGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YLLRVVSGNMTFMQQRRRYQQAYENLSAAELQARFDALPDAEKVSLLKDIEDENPKQQAP HHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC SDP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA