| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is comB [H]
Identifier: 33862669
GI number: 33862669
Start: 444328
End: 445059
Strand: Reverse
Name: comB [H]
Synonym: PMT0396
Alternate gene names: 33862669
Gene position: 445059-444328 (Counterclockwise)
Preceding gene: 33862674
Following gene: 33862668
Centisome position: 18.46
GC content: 55.46
Gene sequence:
>732_bases ATGCAGCTCGCTTATTTCCATGTGGCCGCGGATGTGCCTCAGGGGGCTGAGCCTGATGCTGCTGTCGTCATCGACGTTCT CAGAGCCACCACCACCATCGCCTGGGCTTTAAACAACGGTGCCGAAGCTGTTGAAACCTTTGCTGATTTGGACCAACTGA GGCAGAGCGCCGCTCAATGGCCGGAGTCTTCCCGTTTGATGCTTGGTGAGCGAGGCGGACAGCGCATTGAGGGATTTGAT CTGGGGAATTCCCCCGTCGCTGTGGTGCCCGAGCAAGTGGCTGGCAAAAGACTATTTATGAGCACGACTAACGGCACGCG CTCGTTGCAGCGAGTGCGTGGGGTTCAGCGTTTATTCACTTTGGCACTACCAAACCGCAAAGCTGTTGCAGACCACTTGT TAATGGATCCACCTGAGCAACTTTGGATTGTTGGTAGTGGCTGGGAAGGGGCCTACTCCCTGGAGGACTCTTTGGCGGCC GGAGCATTGGCCGATTTGCTATTGGATGCTGCGGCTGATGAGGCTTGTGTCGCGAACGACGAACTCACTGCTGCACTAGC CCTTTGGCAGCAGTGGAAGCACGATCCAGAAGCCTGTCTTCGTCAAGCCAGCCATGGCCAACGCTTAATTGGGCTTGGCG ATCACGATGCAGATTTCAGATGTTGTGCTGAATTGGATCGGCTTTCTGTGGTTCCTGTTCAGGTCAAACCCGGAGTCCTT TGTGCCTCTTGA
Upstream 100 bases:
>100_bases GTCTTGGGACGCAGGTCCGGGACGAAGCAGGGGCATGGTTGGTAAGACAGCCAGCAAAATTATCTAGTTACTGTGGCGCA CGTCGTTCCCTATCGAGGCC
Downstream 100 bases:
>100_bases AACCTCACTGCGATCTAAAGTTTCGCTCTCTGTTTCAACCCTGTGACCGACTTTCTGGCAGCCGCTTTGCAGCTGACGAG CACCTCGGATCCAGAGCTCA
Product: 2-phosphosulfolactate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQWPESSRLMLGERGGQRIEGFD LGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFTLALPNRKAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAA GALADLLLDAAADEACVANDELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL CAS
Sequences:
>Translated_243_residues MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQWPESSRLMLGERGGQRIEGFD LGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFTLALPNRKAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAA GALADLLLDAAADEACVANDELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL CAS >Mature_243_residues MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQWPESSRLMLGERGGQRIEGFD LGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFTLALPNRKAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAA GALADLLLDAAADEACVANDELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL CAS
Specific function: Unknown
COG id: COG2045
COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005238 - InterPro: IPR022995 [H]
Pfam domain/function: PF04029 2-ph_phosp [H]
EC number: =3.1.3.71 [H]
Molecular weight: Translated: 26149; Mature: 26149
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQW CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCC PESSRLMLGERGGQRIEGFDLGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFT CCCCCEEEECCCCCEEECEECCCCCEEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHH LALPNRKAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAAGALADLLLDAAADEACVAND HHCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCC ELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCEE CAS ECC >Mature Secondary Structure MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQW CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCC PESSRLMLGERGGQRIEGFDLGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFT CCCCCEEEECCCCCEEECEECCCCCEEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHH LALPNRKAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAAGALADLLLDAAADEACVAND HHCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCC ELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCEE CAS ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA