| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is yqaB [C]
Identifier: 33862664
GI number: 33862664
Start: 439885
End: 440562
Strand: Direct
Name: yqaB [C]
Synonym: PMT0391
Alternate gene names: 33862664
Gene position: 439885-440562 (Clockwise)
Preceding gene: 33862663
Following gene: 33862670
Centisome position: 18.25
GC content: 54.28
Gene sequence:
>678_bases ATGTCCTTCCCTGCGGCCTGCTTGTTTGATCTCGATGGAGTGTTGTTGGATACTGAACCTCTACATGCTCAGGCCTGGTC TCAAACAGCGGCTGTCTTTGCTACCAGTCTCAGTACAAGTCAGTTGTTGATGTTAAAAGGTCGGCGGCGGCTTGATTGTG CTCAGCTGGTCAACAACTGGTTGAACACCCCGGTAGGGATCGAACAGCTCTTAGCCGTGCGCCAGCCGATCGCAAAGCAT CTGCTCAGTCAGGCCAAAGCCATGCCTGGAGCGGAGGAATTGGTTCGCTGGTGCTACGACCACAGGCTGCCAATGGCCAT GGCCTCCAGTAGTACGGCAGATGCCGTGGCATTTAAAAGTATCCATCACAGCTGGCTTGCACAGATTCAGACTCGAGTTC TTGGCGATGATCTATCTCTTACAGCAGGCAAACCCGCTCCAGATCCTTATCTGCTTGCCGCGCGGCGGCTGGCGGTCAAG CCGACTGCCTGTTGGGCATTGGAAGACTCTCAGGCCGGCACACAGGCGGCTCTAGCCGCAGGGTGTCATGTCTGGGTGCT GAGCGAAAACGAAGTCCACATCAATTGCGATGGCAAGTTTAAAGATGAGAATCCTCGTCAAATCGCTCAGTTAAAAACCG TTCTTGACCATCTCCAGCAGGCTTGGGATGCACTCTGA
Upstream 100 bases:
>100_bases CAACCTCCTGTTAAACCATTGACAACTTGCATCCAATCGAAAATAACTGAGCTGGATATTGAGTTTTAATCAAGTCAACC GAGAGGGTGCGCATTGGTTC
Downstream 100 bases:
>100_bases AAAGCTCAGTAGAGACGGCTTAAAACAAAATCAGGTAGTTCCATTAATGCACGCTGGCAAGGTGAATCTGGTAGCCAAGC GATGGCTTCACGAGATTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLLMLKGRRRLDCAQLVNNWLNTPVGIEQLLAVRQPIAKH LLSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKSIHHSWLAQIQTRVLGDDLSLTAGKPAPDPYLLAARRLAVK PTACWALEDSQAGTQAALAAGCHVWVLSENEVHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL
Sequences:
>Translated_225_residues MSFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLLMLKGRRRLDCAQLVNNWLNTPVGIEQLLAVRQPIAKH LLSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKSIHHSWLAQIQTRVLGDDLSLTAGKPAPDPYLLAARRLAVK PTACWALEDSQAGTQAALAAGCHVWVLSENEVHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL >Mature_224_residues SFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLLMLKGRRRLDCAQLVNNWLNTPVGIEQLLAVRQPIAKHL LSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKSIHHSWLAQIQTRVLGDDLSLTAGKPAPDPYLLAARRLAVKP TACWALEDSQAGTQAALAAGCHVWVLSENEVHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=188, Percent_Identity=32.9787234042553, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI207113149, Length=211, Percent_Identity=29.3838862559242, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI296011028, Length=155, Percent_Identity=32.9032258064516, Blast_Score=91, Evalue=6e-19, Organism=Escherichia coli, GI1789046, Length=178, Percent_Identity=30.8988764044944, Blast_Score=79, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17554716, Length=230, Percent_Identity=27.8260869565217, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI17137324, Length=187, Percent_Identity=32.620320855615, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI116008157, Length=187, Percent_Identity=31.5508021390374, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI45550911, Length=187, Percent_Identity=28.3422459893048, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI24580849, Length=140, Percent_Identity=30, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24641; Mature: 24509
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLLMLKGRRRLDCAQLVNNW CCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHH LNTPVGIEQLLAVRQPIAKHLLSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHH IHHSWLAQIQTRVLGDDLSLTAGKPAPDPYLLAARRLAVKPTACWALEDSQAGTQAALAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHC GCHVWVLSENEVHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL CCEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLLMLKGRRRLDCAQLVNNW CCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHH LNTPVGIEQLLAVRQPIAKHLLSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHH IHHSWLAQIQTRVLGDDLSLTAGKPAPDPYLLAARRLAVKPTACWALEDSQAGTQAALAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHC GCHVWVLSENEVHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL CCEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]