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The map label for this gene is yigC [C]

Identifier: 33862670

GI number: 33862670

Start: 445124

End: 446689

Strand: Direct

Name: yigC [C]

Synonym: PMT0397

Alternate gene names: 33862670

Gene position: 445124-446689 (Clockwise)

Preceding gene: 33862664

Following gene: 33862671

Centisome position: 18.46

GC content: 54.92

Gene sequence:

>1566_bases
ATGCCCCTGCTTCGTCCCGGACCTGCGTCCCAAGACATGCGGGACTTCCTAGCCCTACTTGAGCAACGTGGCCAACTAAG
GCGGATCACTGCCCCCGTAGAACCAGATTTAGAACTCGCCGCTATTACTGATCGAGTGCTGGGCTTGGGTGGGCCGGCCC
TGTTGTTCGAAAACGTGATTGGTTCATCGATGCCAGTGGCAGTGAATCTGATGGGCACCTTGGAGCGAGTGGTGTGGAGC
ATGGGTCTGGACAACGCTCAGCAACTTGAGGATCTGGGAACTCGTTTGGCTCTGCTGCAACAACCAAGGCCGCCAAAGGG
TCTGCAAGAAACCAGACAGTTTGCAAGTGTGTTTTGGGATCTGATCAAAGCGCGACCAGATCTGGATCTCACACCTCCCT
GCCATCAGCAGGTGCTGCGTGGAGATGCCTTGAATCTCGACAATCTGCCTTTGATCCGGCCTTGGCCAGGAGATGCCAGT
GGTGTGATCACCCTGGGTCTTGTGATTACAAAAGACCCGGAGACGGGAGTGCCGAATGTGGGGGTCTATCGCCTACAACG
CCAATCGCCAAAGACCATGACGGTGCATTGGCTGAGCGTTCGTGGCGGAGCCAGGCACCTACGCAAAGCTGCTGCCATGG
GTCAGAAGCTTGAGGTGGCCATTGCTATTGGTGTACACCCTCTGCTGATCATGGCCGCAGCAACTCCGATTCCTGTGCAA
CTCAGTGAATGGCTTTTTGCTGGTCTTTATGCAGGAGAGGGTGTACGGCTCACTGGCTGCAAAACACTGGATCTGAAAGT
CCCTAGCCACAGCGAAGTGGTGTTGGAAGGAACCATTACACCAGGTGAGGAATTAGAGGATGGTCCATTTGGTGACCATA
TGGGCTTCTACGGAGGAGTGGAGTCCTCACCATTGGTGCGCTTCCACTGCGTGACTCAACGTCGCGATCCGATTTTCCTC
ACGACGTTTAGCGGCCGCCCACCCAAGGAAGAAGCGATGCTCGCCATCGCTTTGAACCGCATCTACACGCCCATCTTGCG
TCAACAGGTGTCGGAGATTGTTGACTTCTTTCTACCGATGGAGGCCCTCAGTTACAAGCTGGCGGTGATTGCAATCGATA
AGTCTTATCCAGGACAAGCCAAGCGTGCCGCGATGGCTTTCTGGAGCGCCTTGCCCCAATTCACCTATACAAAATTCGTT
GTCGTGGTAGATGCAAACATCAACGTGAGAGATCCACGCCAAGTGGTATGGGCTATCGCTGCACAGGTCGATCCGCAAAG
GGATCTCTTTGTACTTGAGAACACCCCCTTCGACAGCCTTGATTTCGCTAGCGAACATCTAGGGCTTGGAGGCAGGATGG
CCATCGACGCCACCACTAAGATTGGCCCTGAGAAGCGCCATGAATGGGGCGAGCCACTCAGCCGGGATGCAGATCTAGAA
AGCAGGGTGGATGCTCGATGGCAGGAGCTGGGGCTGGAGGATTTGGGTAGCGAAGAACCTGATCCAAGCCTGTTCGGCTA
TGTGATGGAGAGCCTTTGTCGTCAAGCGATGGTCAAAAAGACCTGA

Upstream 100 bases:

>100_bases
CACATCCGCGGCCACATGGAAATAAGCGAGCTGCATGGCCTCGATAGGGAACGACGTGCGCCACAGTAACTAGATAATTT
TGCTGGCTGTCTTACCAACC

Downstream 100 bases:

>100_bases
ATTAAAAATGGACTGTTACCTAAAAACACTCGGCAGATGTAGATATCGGCTGGTTGAGATGGTCCAAAAGAAACAAATTA
CACAGCACAAAAACAAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MPLLRPGPASQDMRDFLALLEQRGQLRRITAPVEPDLELAAITDRVLGLGGPALLFENVIGSSMPVAVNLMGTLERVVWS
MGLDNAQQLEDLGTRLALLQQPRPPKGLQETRQFASVFWDLIKARPDLDLTPPCHQQVLRGDALNLDNLPLIRPWPGDAS
GVITLGLVITKDPETGVPNVGVYRLQRQSPKTMTVHWLSVRGGARHLRKAAAMGQKLEVAIAIGVHPLLIMAAATPIPVQ
LSEWLFAGLYAGEGVRLTGCKTLDLKVPSHSEVVLEGTITPGEELEDGPFGDHMGFYGGVESSPLVRFHCVTQRRDPIFL
TTFSGRPPKEEAMLAIALNRIYTPILRQQVSEIVDFFLPMEALSYKLAVIAIDKSYPGQAKRAAMAFWSALPQFTYTKFV
VVVDANINVRDPRQVVWAIAAQVDPQRDLFVLENTPFDSLDFASEHLGLGGRMAIDATTKIGPEKRHEWGEPLSRDADLE
SRVDARWQELGLEDLGSEEPDPSLFGYVMESLCRQAMVKKT

Sequences:

>Translated_521_residues
MPLLRPGPASQDMRDFLALLEQRGQLRRITAPVEPDLELAAITDRVLGLGGPALLFENVIGSSMPVAVNLMGTLERVVWS
MGLDNAQQLEDLGTRLALLQQPRPPKGLQETRQFASVFWDLIKARPDLDLTPPCHQQVLRGDALNLDNLPLIRPWPGDAS
GVITLGLVITKDPETGVPNVGVYRLQRQSPKTMTVHWLSVRGGARHLRKAAAMGQKLEVAIAIGVHPLLIMAAATPIPVQ
LSEWLFAGLYAGEGVRLTGCKTLDLKVPSHSEVVLEGTITPGEELEDGPFGDHMGFYGGVESSPLVRFHCVTQRRDPIFL
TTFSGRPPKEEAMLAIALNRIYTPILRQQVSEIVDFFLPMEALSYKLAVIAIDKSYPGQAKRAAMAFWSALPQFTYTKFV
VVVDANINVRDPRQVVWAIAAQVDPQRDLFVLENTPFDSLDFASEHLGLGGRMAIDATTKIGPEKRHEWGEPLSRDADLE
SRVDARWQELGLEDLGSEEPDPSLFGYVMESLCRQAMVKKT
>Mature_520_residues
PLLRPGPASQDMRDFLALLEQRGQLRRITAPVEPDLELAAITDRVLGLGGPALLFENVIGSSMPVAVNLMGTLERVVWSM
GLDNAQQLEDLGTRLALLQQPRPPKGLQETRQFASVFWDLIKARPDLDLTPPCHQQVLRGDALNLDNLPLIRPWPGDASG
VITLGLVITKDPETGVPNVGVYRLQRQSPKTMTVHWLSVRGGARHLRKAAAMGQKLEVAIAIGVHPLLIMAAATPIPVQL
SEWLFAGLYAGEGVRLTGCKTLDLKVPSHSEVVLEGTITPGEELEDGPFGDHMGFYGGVESSPLVRFHCVTQRRDPIFLT
TFSGRPPKEEAMLAIALNRIYTPILRQQVSEIVDFFLPMEALSYKLAVIAIDKSYPGQAKRAAMAFWSALPQFTYTKFVV
VVDANINVRDPRQVVWAIAAQVDPQRDLFVLENTPFDSLDFASEHLGLGGRMAIDATTKIGPEKRHEWGEPLSRDADLES
RVDARWQELGLEDLGSEEPDPSLFGYVMESLCRQAMVKKT

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=489, Percent_Identity=45.6032719836401, Blast_Score=451, Evalue=1e-128,
Organism=Saccharomyces cerevisiae, GI6320748, Length=525, Percent_Identity=23.8095238095238, Blast_Score=107, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 57464; Mature: 57333

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLRPGPASQDMRDFLALLEQRGQLRRITAPVEPDLELAAITDRVLGLGGPALLFENVI
CCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
GSSMPVAVNLMGTLERVVWSMGLDNAQQLEDLGTRLALLQQPRPPKGLQETRQFASVFWD
CCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LIKARPDLDLTPPCHQQVLRGDALNLDNLPLIRPWPGDASGVITLGLVITKDPETGVPNV
HHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEEEEEECCCCCCCCCC
GVYRLQRQSPKTMTVHWLSVRGGARHLRKAAAMGQKLEVAIAIGVHPLLIMAAATPIPVQ
CEEEEECCCCCEEEEEEEEECCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCHH
LSEWLFAGLYAGEGVRLTGCKTLDLKVPSHSEVVLEGTITPGEELEDGPFGDHMGFYGGV
HHHHHHHHHHCCCCEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
ESSPLVRFHCVTQRRDPIFLTTFSGRPPKEEAMLAIALNRIYTPILRQQVSEIVDFFLPM
CCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EALSYKLAVIAIDKSYPGQAKRAAMAFWSALPQFTYTKFVVVVDANINVRDPRQVVWAIA
HHHCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHH
AQVDPQRDLFVLENTPFDSLDFASEHLGLGGRMAIDATTKIGPEKRHEWGEPLSRDADLE
HCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHH
SRVDARWQELGLEDLGSEEPDPSLFGYVMESLCRQAMVKKT
HHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLLRPGPASQDMRDFLALLEQRGQLRRITAPVEPDLELAAITDRVLGLGGPALLFENVI
CCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
GSSMPVAVNLMGTLERVVWSMGLDNAQQLEDLGTRLALLQQPRPPKGLQETRQFASVFWD
CCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LIKARPDLDLTPPCHQQVLRGDALNLDNLPLIRPWPGDASGVITLGLVITKDPETGVPNV
HHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEEEEEECCCCCCCCCC
GVYRLQRQSPKTMTVHWLSVRGGARHLRKAAAMGQKLEVAIAIGVHPLLIMAAATPIPVQ
CEEEEECCCCCEEEEEEEEECCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCHH
LSEWLFAGLYAGEGVRLTGCKTLDLKVPSHSEVVLEGTITPGEELEDGPFGDHMGFYGGV
HHHHHHHHHHCCCCEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
ESSPLVRFHCVTQRRDPIFLTTFSGRPPKEEAMLAIALNRIYTPILRQQVSEIVDFFLPM
CCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EALSYKLAVIAIDKSYPGQAKRAAMAFWSALPQFTYTKFVVVVDANINVRDPRQVVWAIA
HHHCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHH
AQVDPQRDLFVLENTPFDSLDFASEHLGLGGRMAIDATTKIGPEKRHEWGEPLSRDADLE
HCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHH
SRVDARWQELGLEDLGSEEPDPSLFGYVMESLCRQAMVKKT
HHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]