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The map label for this gene is 33862645

Identifier: 33862645

GI number: 33862645

Start: 418496

End: 419083

Strand: Direct

Name: 33862645

Synonym: PMT0372

Alternate gene names: NA

Gene position: 418496-419083 (Clockwise)

Preceding gene: 33862644

Following gene: 33862646

Centisome position: 17.36

GC content: 45.24

Gene sequence:

>588_bases
GTGATTGCCAAAGTTGATGGAAATCTCTCTGGTGAATATGATGGCCTTGATGAAGGAGATTCAATAGGCAGATTTAAAAG
CGATAACGGAGGAACACTTTATCTTTTCATCACAGACAAAGGTGGTGATGGTAATGATATTGAGCTTTATACGAAATCAT
TCTCTGGTGTTCTTCCTGAGAGCTTGAGAGATCCAAGAATGATTGTTTCTGATGCTGATGATTCCTTGGCTGGAGCATCT
GCAGATGAAGTGATCTTTGGCGGTCGTGGTGATGATGTTCTACTAGGAGGCGCTGGAGATGATCAAGTTGCTGGAGGAAA
TGGCGATGATTGGCTATATGGTGGTTTCGGTGATGACACCCTTAAAGGTGATCGTGGAGCTGACACCTACTGGCTGAGTC
GTGGTGTTGATGTGATCATCGTCTTTTCATTCGCTGAAAACGATCGCATCTCTGTTGGTGATGGGGTTCTGTGTTCCCTG
AGGCAAGCCGGAGATGATCTATCGATCAGAGCAGACGGCATTCACACCACCCTTCTGGATGTTGATAAGGATGAGTTCCT
AGCTGCAGATGTGATTGATTACATCTGA

Upstream 100 bases:

>100_bases
AGACCACGATTGGATTGAAATTACCGGTGATCTAGAACTCGCAGGAAAACTCGATGTTTCGCTAATTGATGGCTTTAAAC
TTTCTGCTGGTGATTCCTTT

Downstream 100 bases:

>100_bases
GCGGTAGAAACCGTTGTTATGCCAACAAGGTTCAAACGATGCCGTGATCCCCTAGCTGGTCGGCTGATCTGCTGACAAGC
TGGGCGCATCATCTCTTGCC

Product: hemolysin-type calcium-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MIAKVDGNLSGEYDGLDEGDSIGRFKSDNGGTLYLFITDKGGDGNDIELYTKSFSGVLPESLRDPRMIVSDADDSLAGAS
ADEVIFGGRGDDVLLGGAGDDQVAGGNGDDWLYGGFGDDTLKGDRGADTYWLSRGVDVIIVFSFAENDRISVGDGVLCSL
RQAGDDLSIRADGIHTTLLDVDKDEFLAADVIDYI

Sequences:

>Translated_195_residues
MIAKVDGNLSGEYDGLDEGDSIGRFKSDNGGTLYLFITDKGGDGNDIELYTKSFSGVLPESLRDPRMIVSDADDSLAGAS
ADEVIFGGRGDDVLLGGAGDDQVAGGNGDDWLYGGFGDDTLKGDRGADTYWLSRGVDVIIVFSFAENDRISVGDGVLCSL
RQAGDDLSIRADGIHTTLLDVDKDEFLAADVIDYI
>Mature_195_residues
MIAKVDGNLSGEYDGLDEGDSIGRFKSDNGGTLYLFITDKGGDGNDIELYTKSFSGVLPESLRDPRMIVSDADDSLAGAS
ADEVIFGGRGDDVLLGGAGDDQVAGGNGDDWLYGGFGDDTLKGDRGADTYWLSRGVDVIIVFSFAENDRISVGDGVLCSL
RQAGDDLSIRADGIHTTLLDVDKDEFLAADVIDYI

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20592; Mature: 20592

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKVDGNLSGEYDGLDEGDSIGRFKSDNGGTLYLFITDKGGDGNDIELYTKSFSGVLPE
CEEEECCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCH
SLRDPRMIVSDADDSLAGASADEVIFGGRGDDVLLGGAGDDQVAGGNGDDWLYGGFGDDT
HHCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCC
LKGDRGADTYWLSRGVDVIIVFSFAENDRISVGDGVLCSLRQAGDDLSIRADGIHTTLLD
CCCCCCCCEEEECCCCEEEEEEEECCCCEEEECCCEEEEHHHCCCCEEEEECCEEEEEEE
VDKDEFLAADVIDYI
CCCHHHHHHHHHHCC
>Mature Secondary Structure
MIAKVDGNLSGEYDGLDEGDSIGRFKSDNGGTLYLFITDKGGDGNDIELYTKSFSGVLPE
CEEEECCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCH
SLRDPRMIVSDADDSLAGASADEVIFGGRGDDVLLGGAGDDQVAGGNGDDWLYGGFGDDT
HHCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCC
LKGDRGADTYWLSRGVDVIIVFSFAENDRISVGDGVLCSLRQAGDDLSIRADGIHTTLLD
CCCCCCCCEEEECCCCEEEEEEEECCCCEEEECCCEEEEHHHCCCCEEEEECCEEEEEEE
VDKDEFLAADVIDYI
CCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA