| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862646
Identifier: 33862646
GI number: 33862646
Start: 419186
End: 421699
Strand: Direct
Name: 33862646
Synonym: PMT0373
Alternate gene names: NA
Gene position: 419186-421699 (Clockwise)
Preceding gene: 33862645
Following gene: 33862647
Centisome position: 17.39
GC content: 56.52
Gene sequence:
>2514_bases ATGGCCCTTTTTGGCTTTTCAGCTTTCAGATCCTTGTTGAAGCGTGGATCGAGCTTGAAGCCTTGGAGTGTGCCTGCCGC CAGCTGGAGCCGTGCTTTTGGATTGCCTTGGCAACAGCCTTACACGGTGCGTTATGCCAGCAATCTCGATGATGGGCCCT GGCATGGCATGCCCCTGGGAGGCTTCGGGGCCGGTTGTATCGGGCGTAGCCCACGCGGTGATTTCAATCTCTGGAATCTT GATGGTGGTGAGCATTGGCAGGGCAGCATTCCTGATTGCCAGTTCGCTTTGTTTGAGCGGCAGGGGGATCAGGTGCGTGC TCATGCGCTGGCTACAGCGCCACAAACCGATGACTCTCAGCCTGAGCTAGACAAGCCTCTCTCCTCTTGGAGCTGGTATC CAGCCAGTACAGAGCAACGCAAGACTGGTAGCTATTCAGCCCGCTATCCGCTCAGTTGGACCCATTACAAAGGAGTCTTC GCGGCTGAGCTGGTTTGCGAAGCGTTTAGTCCAATCCTTCCTGGTGATTACCGACGCACGAGCTACCCCCTGGCCGTGTT TCGTTGGCAGCTGCAGAACCCAACATCGCAATCTCTGGAATTGTCGCTGCTGCTGAGTTGGCGCAACACATGTGGCTGGT TCACAAACACCGATCCCTCGGCCAGCGTGCATTTCCGCGATGATGGGAGCCCTGAACACAGTTATGTGCCTGCCATCGGC CGTGGCGAGGGGCAGTGCAATCGTTGGATTGATCAGCCAGGGCTGATTGGTGTCTTGATGGAGGGTGAGCGAGCTGACCC ATTGGCTGAGGGCCAAGGGCAGTGGTGTTTGGCTGTTCCTGATCATCTGCCTGGAGTGGAGGTGATGCGTTGTAGCCGTT GGGATCCCAGCGGAGATGGCAGCGAACTGTGGAGTTCCTTCGCAAGTGAAGGAACCATTCCAAACAGCAATACCGCACAC AAGAGCTTGGCGGGGGAGCAGACCAGCGCTGCTTTAGCGGTGAAGGTCACCCTGGCACCTGGCGAAAGTCTTGAGATCCC TGTGGTGATCAGTTGGGATCTACCGGTGACGGCTTTCGCTACAGGCGTTCGCGATTTGCGTCGTTATACCGACTTTCATG GCAGCGATGGTCAGGCGGCCGCCGCTCTTGCTGCAGAAGCCCTGAGTGATTGGTCTGATTGGCGTGAGCAGATTGATGCC TGGCAAGCACCGGTGCTGGCTCGTGAGGATCTGCCGGAGCGCTTGCGAATGGCTTTGTTCAATGAGCTCTACGACTTGGC TAGCGGTGGCAGCCTTTGGACGGCAGCCCGTCCAGGAGATCCGGTGGGTCGCTTTGGGGTTCTTGAGTGCTTCGACTACG CCTGGTACGAAAGTCTTGATGTGCGCCTCTATGGCTCCTTGGCTTTGCTGCAGTTGTGGCCTGAGCTCGATAAGGCCGTC TTGCGTAGTTTTGCTCGAGCCATTCCAGCGGCAGATGCCACGCCACGACCAATTGGCTGGTACTTCACCCAGGGGCGTGG CCGGGTCGAGGCCCCCCGAAAGAGGGCGGCGGCTACTCCCCATGATCTGGGAGCACCGAATGAGTCGCCGTTTGATGCCA CCAACTACACCGCTTATCAGGATTGCAATCTCTGGAAAGATCTGGCCAGTGATTATGTGTTGCAGGTATGGCGAACGTTT CTTCTCTCACCGAATGGTGAAGATCTGAGCTTCTTGGCTGAATGCTGGCCGGCGGTAGTGCAAGCCCTCAGTTATCTCAA GCGGTTTGATGTCAATCACGATGGTCTGCCTGATAACGGTGGTGCTCCGGATCAGACCTTTGACGATTGGCCTTTACAAG GCGTGAGCGCCTATTGCGGTGCTCTTTGGATTGCAGCTCTTGAGGCTGCTCTAGCCATGGCACAGCGCTTGCAATTGGAC TTAGGGCTGAATACGGCAGAGGAGCAACATCAGTTCAGCGGTTGGCTTGAGCAATCACGGGTCAACTTCGATCGGCTGCT TTGGAATGGGGAGTATTACAAGATCGATGCTGAGAGTGGTACGCCCGTGGTGATGGCTGATCAACTCTGTGGTGATTTCT ATGCACGCTTGCTGGGGCTGCCCTCTGTTGTTGCTGATGAACGCAGTCGCAGCAGTCTGAATGCAGTCAAAGAGGCCTGC TTTGAAGGCTTTGAAGGCGGCCGTTTGGGAGTTGCCAATGGTTTGTGCCGTGATGGCATGCCACTTGATCCCAAGGGAAC CCATCCCTTGGAGGTATGGACTGGTATCAACTTCGGTTTGGCGGCCTACTACCGATTGATGGGCGATGCAACGACGGCCA CAGCCATCTGTTCCGCGGTGGTTAATCAGGTGTATGGCGGTGGCTTGCAGTTCCGCACCCCAGAAGCGATTACTGCAGTG AAGACCTATAGGGCTTGCCACTATTTGCGTGCAATGGCGATCTGGGCCCTGTGGGCAACGCATACGGATTGGCAGTTGAT TCCAGGTGCCGAACGGGCAGGGTCTGAGTGGTGA
Upstream 100 bases:
>100_bases GGTAGAAACCGTTGTTATGCCAACAAGGTTCAAACGATGCCGTGATCCCCTAGCTGGTCGGCTGATCTGCTGACAAGCTG GGCGCATCATCTCTTGCCCC
Downstream 100 bases:
>100_bases ATGAGTGGCGCCAATCTGTGAGGGATGTCCTATCGGCAGCGATGGTTTTTTGCATACGCTGTTAAGACCTTCTTTGAGGT CATGTCCAGCGCAGGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 837; Mature: 836
Protein sequence:
>837_residues MALFGFSAFRSLLKRGSSLKPWSVPAASWSRAFGLPWQQPYTVRYASNLDDGPWHGMPLGGFGAGCIGRSPRGDFNLWNL DGGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQPELDKPLSSWSWYPASTEQRKTGSYSARYPLSWTHYKGVF AAELVCEAFSPILPGDYRRTSYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIG RGEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDGSELWSSFASEGTIPNSNTAH KSLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFATGVRDLRRYTDFHGSDGQAAAALAAEALSDWSDWREQIDA WQAPVLAREDLPERLRMALFNELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAV LRSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQDCNLWKDLASDYVLQVWRTF LLSPNGEDLSFLAECWPAVVQALSYLKRFDVNHDGLPDNGGAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLD LGLNTAEEQHQFSGWLEQSRVNFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEAC FEGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAVVNQVYGGGLQFRTPEAITAV KTYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEW
Sequences:
>Translated_837_residues MALFGFSAFRSLLKRGSSLKPWSVPAASWSRAFGLPWQQPYTVRYASNLDDGPWHGMPLGGFGAGCIGRSPRGDFNLWNL DGGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQPELDKPLSSWSWYPASTEQRKTGSYSARYPLSWTHYKGVF AAELVCEAFSPILPGDYRRTSYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIG RGEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDGSELWSSFASEGTIPNSNTAH KSLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFATGVRDLRRYTDFHGSDGQAAAALAAEALSDWSDWREQIDA WQAPVLAREDLPERLRMALFNELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAV LRSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQDCNLWKDLASDYVLQVWRTF LLSPNGEDLSFLAECWPAVVQALSYLKRFDVNHDGLPDNGGAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLD LGLNTAEEQHQFSGWLEQSRVNFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEAC FEGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAVVNQVYGGGLQFRTPEAITAV KTYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEW >Mature_836_residues ALFGFSAFRSLLKRGSSLKPWSVPAASWSRAFGLPWQQPYTVRYASNLDDGPWHGMPLGGFGAGCIGRSPRGDFNLWNLD GGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQPELDKPLSSWSWYPASTEQRKTGSYSARYPLSWTHYKGVFA AELVCEAFSPILPGDYRRTSYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIGR GEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDGSELWSSFASEGTIPNSNTAHK SLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFATGVRDLRRYTDFHGSDGQAAAALAAEALSDWSDWREQIDAW QAPVLAREDLPERLRMALFNELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAVL RSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQDCNLWKDLASDYVLQVWRTFL LSPNGEDLSFLAECWPAVVQALSYLKRFDVNHDGLPDNGGAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLDL GLNTAEEQHQFSGWLEQSRVNFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEACF EGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAVVNQVYGGGLQFRTPEAITAVK TYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEW
Specific function: Unknown
COG id: COG4354
COG function: function code G; Predicted bile acid beta-glucosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24308251, Length=549, Percent_Identity=34.7905282331512, Blast_Score=295, Evalue=1e-79, Organism=Caenorhabditis elegans, GI71992715, Length=803, Percent_Identity=31.6313823163138, Blast_Score=326, Evalue=3e-89, Organism=Caenorhabditis elegans, GI71992731, Length=803, Percent_Identity=31.6313823163138, Blast_Score=326, Evalue=4e-89, Organism=Caenorhabditis elegans, GI71992723, Length=803, Percent_Identity=31.6313823163138, Blast_Score=325, Evalue=6e-89, Organism=Caenorhabditis elegans, GI17562976, Length=800, Percent_Identity=26.5, Blast_Score=254, Evalue=9e-68, Organism=Drosophila melanogaster, GI45552032, Length=791, Percent_Identity=29.2035398230088, Blast_Score=320, Evalue=2e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92347; Mature: 92216
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFGFSAFRSLLKRGSSLKPWSVPAASWSRAFGLPWQQPYTVRYASNLDDGPWHGMPLG CCEECHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC GFGAGCIGRSPRGDFNLWNLDGGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQ CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEHHHEECCCCCCCCC PELDKPLSSWSWYPASTEQRKTGSYSARYPLSWTHYKGVFAAELVCEAFSPILPGDYRRT CCHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCC SYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIG CCCEEEEEEECCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC RGEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDG CCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHEECCCCCCCCH SELWSSFASEGTIPNSNTAHKSLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFA HHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHH TGVRDLRRYTDFHGSDGQAAAALAAEALSDWSDWREQIDAWQAPVLAREDLPERLRMALF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH NELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAV HHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH LRSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQ HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEC DCNLWKDLASDYVLQVWRTFLLSPNGEDLSFLAECWPAVVQALSYLKRFDVNHDGLPDNG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLDLGLNTAEEQHQFSGWLEQSR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VNFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEAC CCHHHEEECCEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH FEGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAV HCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH VNQVYGGGLQFRTPEAITAVKTYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEW HHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCC >Mature Secondary Structure ALFGFSAFRSLLKRGSSLKPWSVPAASWSRAFGLPWQQPYTVRYASNLDDGPWHGMPLG CEECHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC GFGAGCIGRSPRGDFNLWNLDGGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQ CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEHHHEECCCCCCCCC PELDKPLSSWSWYPASTEQRKTGSYSARYPLSWTHYKGVFAAELVCEAFSPILPGDYRRT CCHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCC SYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIG CCCEEEEEEECCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC RGEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDG CCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHEECCCCCCCCH SELWSSFASEGTIPNSNTAHKSLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFA HHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHH TGVRDLRRYTDFHGSDGQAAAALAAEALSDWSDWREQIDAWQAPVLAREDLPERLRMALF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH NELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAV HHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH LRSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQ HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEC DCNLWKDLASDYVLQVWRTFLLSPNGEDLSFLAECWPAVVQALSYLKRFDVNHDGLPDNG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLDLGLNTAEEQHQFSGWLEQSR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VNFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEAC CCHHHEEECCEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH FEGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAV HCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH VNQVYGGGLQFRTPEAITAVKTYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEW HHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA