| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862594
Identifier: 33862594
GI number: 33862594
Start: 367496
End: 367939
Strand: Reverse
Name: 33862594
Synonym: PMT0321
Alternate gene names: NA
Gene position: 367939-367496 (Counterclockwise)
Preceding gene: 33862595
Following gene: 33862593
Centisome position: 15.26
GC content: 57.21
Gene sequence:
>444_bases ATGGCATTCCGGACTTCCATCTTTGACCTGCCAATGATTCACGGTCTGCTCTGGTTCCCCCTGCTCCTGGTTTTTGTGCT TCTCACTGCTCTCGGGTGGCTAGAGAGGCGGCGGCAAAACCTCTTCCGCGTCTGGGCTGAGGACTCTGAGCTATCCAAAC TTGACGGCTCAGGAGCTGCTCGACTGAAACAAGGCATGCTCAGCTGGAGCAGCTTTGAAGCAGGCCGTTTCCAAGAGCAG GGCAACTTTGAAGTCACCAAGCTGGAGATGCTGGAACTGATGGCCCTGACCTCAGGGGAAGCTCCTCTCACCCAAGAATC TCAGGGCCGTTGTCGACTTCGGCTGATCGGCAATGGCCAAGAAATGGATGTGCCCTTTGCCGATGCAGAACAGGCTCGCC GTTGGGTGGATCAGCTGATGGCCCGGGCACGCTGTGACCTGTGA
Upstream 100 bases:
>100_bases GAGCATGTATCCAATGCTCTGGGAGGCTTCTGGTGTAACGCTCGAAGAGCTCGTGAGCCAACTTGTGATCACAGCGAGAG AATAAACAAGTTCCAACTTG
Downstream 100 bases:
>100_bases GCTCATCCACCCCTGATCGACGGCCTGCAAACGGCCCAGGGGTAGAAAGGCGGCGCCGGTTGCGCCAACAACGCCGCCGA GAGCAACTGATCTACCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAFRTSIFDLPMIHGLLWFPLLLVFVLLTALGWLERRRQNLFRVWAEDSELSKLDGSGAARLKQGMLSWSSFEAGRFQEQ GNFEVTKLEMLELMALTSGEAPLTQESQGRCRLRLIGNGQEMDVPFADAEQARRWVDQLMARARCDL
Sequences:
>Translated_147_residues MAFRTSIFDLPMIHGLLWFPLLLVFVLLTALGWLERRRQNLFRVWAEDSELSKLDGSGAARLKQGMLSWSSFEAGRFQEQ GNFEVTKLEMLELMALTSGEAPLTQESQGRCRLRLIGNGQEMDVPFADAEQARRWVDQLMARARCDL >Mature_146_residues AFRTSIFDLPMIHGLLWFPLLLVFVLLTALGWLERRRQNLFRVWAEDSELSKLDGSGAARLKQGMLSWSSFEAGRFQEQG NFEVTKLEMLELMALTSGEAPLTQESQGRCRLRLIGNGQEMDVPFADAEQARRWVDQLMARARCDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16837; Mature: 16706
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRTSIFDLPMIHGLLWFPLLLVFVLLTALGWLERRRQNLFRVWAEDSELSKLDGSGAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHH RLKQGMLSWSSFEAGRFQEQGNFEVTKLEMLELMALTSGEAPLTQESQGRCRLRLIGNGQ HHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC EMDVPFADAEQARRWVDQLMARARCDL CCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFRTSIFDLPMIHGLLWFPLLLVFVLLTALGWLERRRQNLFRVWAEDSELSKLDGSGAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHH RLKQGMLSWSSFEAGRFQEQGNFEVTKLEMLELMALTSGEAPLTQESQGRCRLRLIGNGQ HHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC EMDVPFADAEQARRWVDQLMARARCDL CCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA