| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862580
Identifier: 33862580
GI number: 33862580
Start: 351253
End: 352092
Strand: Direct
Name: 33862580
Synonym: PMT0307
Alternate gene names: NA
Gene position: 351253-352092 (Clockwise)
Preceding gene: 33862579
Following gene: 33862583
Centisome position: 14.57
GC content: 50.48
Gene sequence:
>840_bases TTGATTTCTGCTGACCTCCCTGTGACAGGCCAAGAAAAGTCCACTAATAAAGGGGTCTCTAGCCTGGTTCAGGGAATCCA GCAACGCTTTCAAGCCTTTGTCACTAAGCCAAAGGGGTCTTCGAAGTCCTCGCCAGAGGCTTTTGAAAAGCAGCCCAGCA GCAACGAGGATAGGGTCCAGGATTCAAGCTATGTTTCACTGCATCCCAAAGACTCAAAGTGGGCCCGCTGTAGCTGGAGC ATCAGCAAAGCCGATCAGCAACGGGCAAAAAAATCAAAGGCAAAAGCCCTATGTCTGCGGCTGGTCGATTTGTATAGCCA CACCGATGCCTTGATCAGTAGGCATGCCATCAAAGAAATTCTTGTCGATAGCGAGGCTAATGAGTGGTTCCTTCCTGTGC CGATGGGCGGCCGCGACTATCTTCTTGAGCTCGGCTATCAGCTTCCTAAGGGAGGTTGGCTGTCGCTAGCTTTCTCAGAA CCGGTATACGTTCCGCAAAGCGATCCTTCTGAGCAGAGTTCCGATAGCTCATCTAGTTCTTTGCGCCAGGAGCAAAACGT CGCCTCCCAACCTTTTTCTCTGACTTCGTCAGTTGCTGAAGTTGCTGATTTTGGTGATGACGGAATGCACGAGCAGATGT ATCAGCGTGCAATTTCAAATAACCCCAGCTTTGGAATTGGCTCGGAGACTCTTCAGGGGGATGGTCGTTCCGATCGCTCC AGGCGGTTTAGTAATGATTCTGGCTCTGGATGGTTGGATAGTGGTCGTGGACAGTTTTTACGTCGCCGTAAATCTCAGCA GAATGATCCCGACAATGCCTCTGATTCTGATTGGTTCTGA
Upstream 100 bases:
>100_bases TCGGTTCTGAGCTTTTGTTCGGGCCGATCTTTGTTCTGCGTATGTCAGGAGATTCTGGCAAACGCTTTTATCAAGGCAAA AATGGCCTAAATGATTTGAC
Downstream 100 bases:
>100_bases CCGGTTGGTGATCTCTTCGTTCATTGTTTGCTTCTGATCTGTATTGGTTCAATCGTTGGTTCATACAGACCAGCGAGAGG TGTATGAGTTGATGAATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MISADLPVTGQEKSTNKGVSSLVQGIQQRFQAFVTKPKGSSKSSPEAFEKQPSSNEDRVQDSSYVSLHPKDSKWARCSWS ISKADQQRAKKSKAKALCLRLVDLYSHTDALISRHAIKEILVDSEANEWFLPVPMGGRDYLLELGYQLPKGGWLSLAFSE PVYVPQSDPSEQSSDSSSSSLRQEQNVASQPFSLTSSVAEVADFGDDGMHEQMYQRAISNNPSFGIGSETLQGDGRSDRS RRFSNDSGSGWLDSGRGQFLRRRKSQQNDPDNASDSDWF
Sequences:
>Translated_279_residues MISADLPVTGQEKSTNKGVSSLVQGIQQRFQAFVTKPKGSSKSSPEAFEKQPSSNEDRVQDSSYVSLHPKDSKWARCSWS ISKADQQRAKKSKAKALCLRLVDLYSHTDALISRHAIKEILVDSEANEWFLPVPMGGRDYLLELGYQLPKGGWLSLAFSE PVYVPQSDPSEQSSDSSSSSLRQEQNVASQPFSLTSSVAEVADFGDDGMHEQMYQRAISNNPSFGIGSETLQGDGRSDRS RRFSNDSGSGWLDSGRGQFLRRRKSQQNDPDNASDSDWF >Mature_279_residues MISADLPVTGQEKSTNKGVSSLVQGIQQRFQAFVTKPKGSSKSSPEAFEKQPSSNEDRVQDSSYVSLHPKDSKWARCSWS ISKADQQRAKKSKAKALCLRLVDLYSHTDALISRHAIKEILVDSEANEWFLPVPMGGRDYLLELGYQLPKGGWLSLAFSE PVYVPQSDPSEQSSDSSSSSLRQEQNVASQPFSLTSSVAEVADFGDDGMHEQMYQRAISNNPSFGIGSETLQGDGRSDRS RRFSNDSGSGWLDSGRGQFLRRRKSQQNDPDNASDSDWF
Specific function: Unknown
COG id: COG3330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30884; Mature: 30884
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISADLPVTGQEKSTNKGVSSLVQGIQQRFQAFVTKPKGSSKSSPEAFEKQPSSNEDRVQ CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHCC DSSYVSLHPKDSKWARCSWSISKADQQRAKKSKAKALCLRLVDLYSHTDALISRHAIKEI CCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVDSEANEWFLPVPMGGRDYLLELGYQLPKGGWLSLAFSEPVYVPQSDPSEQSSDSSSSS HHCCCCCCEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCHHHH LRQEQNVASQPFSLTSSVAEVADFGDDGMHEQMYQRAISNNPSFGIGSETLQGDGRSDRS HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHH RRFSNDSGSGWLDSGRGQFLRRRKSQQNDPDNASDSDWF HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MISADLPVTGQEKSTNKGVSSLVQGIQQRFQAFVTKPKGSSKSSPEAFEKQPSSNEDRVQ CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHCC DSSYVSLHPKDSKWARCSWSISKADQQRAKKSKAKALCLRLVDLYSHTDALISRHAIKEI CCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVDSEANEWFLPVPMGGRDYLLELGYQLPKGGWLSLAFSEPVYVPQSDPSEQSSDSSSSS HHCCCCCCEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCHHHH LRQEQNVASQPFSLTSSVAEVADFGDDGMHEQMYQRAISNNPSFGIGSETLQGDGRSDRS HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHH RRFSNDSGSGWLDSGRGQFLRRRKSQQNDPDNASDSDWF HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA