| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862583
Identifier: 33862583
GI number: 33862583
Start: 356288
End: 357520
Strand: Direct
Name: 33862583
Synonym: PMT0310
Alternate gene names: NA
Gene position: 356288-357520 (Clockwise)
Preceding gene: 33862580
Following gene: 33862584
Centisome position: 14.78
GC content: 56.37
Gene sequence:
>1233_bases ATGGCTGGCAAGGCCCCAGAAGACTTGCCCAAACGGATTGCTTTAGTGCATGAGTGGTTCACGCCCCGTGCCGTGGGGGG TGCTGAGCAGGTCGTGCAATCTATCGATGCTCTGTTGCTCAGATTGGGCTGTCAATCAGACTTGGCAGCTCTGGTTGATG GAGAAAGCCTTAGGCCAGGAAGCTGGCTGGAAGGTCGCGCCATTCAGACCAGTCCGATTCAACATCTCCCGTGGGGAGTG AGCCATGTGCAGCAATACCTGCCCTTATTGCCCCTTGCGATTGAGCAGTTAGATGTGGGTGATTACCCCTTGGTCATCAG CAGCAGCCATCTTGTGGCTAAGGGGGTACTCACCTCTCCTGATCAGCTCCATGTGAGTTACGTGCACACTCCCGTTCGTT ATGCATGGGATCAGATGCATGCCTATTTGCGTCGCTCGGCCTTGGCACAAAGCGGTTTAGGGCCGTTGATCCGTTGGCAA TTGCATGTTCTCAGGCAGTGGGATCAGCTCAGTGGTGCGCGCGTGAATCATCTTTTGGCCAATTCCCGCTTTACAGCGCG GCGGATTGCTTGCTTCTGGGGGCGTGAAGCGGAGGTGGTGCATCCACCGGTGAAGGTGGATCGCTTCCGCTGGGATCAGC CTCGCAATGATGTGTACCTCTGTGTTTGTCGCCTTGTTCCTTACAAGCGAGTGGATCTTGTGATTGAGGCCTTCAATCAA TTGCGCTTGCCACTGTTGGTGGTTGGCGATGGACCGGAGTGGGCATTCCTAGAAGAGTTGGCAGGTCCCACAGTGCAGTT GCTAGGCCGTCAAACCCAGGCGCAGGTTGAGGCCTTGATGGAAAGTTGCCGAGCCTTCGTTTATGCCGCTTTGGAGGACT TTGGAATTGCACCAGTGGAAGCCATGGCAGCAGGGGCCCCAGTGATTGGCTTGGGGAGGGGTGGCTTACTCGATACCGTG CGTTGTGCGGCGGCGGGAAGGCGTTACCCAACAGGGGTCTTGTTCCCTGAACAGACAGTCGCATCAGTCGCGCAGGCGGT TGCCTGGTTTGAGGAACGTCAGCTTTGGCAGCAGTTGACCCCTGAAGTCGTACGCCTTTGCGCAGAACAATTCCGTCCGG AAGCTTTTGCGTCGCGTTTTGAGACTGCACTACGTCAGGCCTGGCAACAACATCAGCAGGCCTGTGCCGTTGCTGCGAGT GACCCTGTGGAGCTTTTAGAGTTTCGATCCTGA
Upstream 100 bases:
>100_bases TGATCGGCATGCTTCAAGTGGGCTTAACCCAGCTTCGGAACGCAGCACTCTTGCTGCAATCGGCTGAGAGACTTCGTGAT GAACTGAGGATCAATCTGCT
Downstream 100 bases:
>100_bases TCTTGAGTAGGCGAGCAGCTAGGAGAGATCATGAGATTGGCCTCCAGGCGCTTTGTGTTTCATGGGTGTAGTAGAGCCCT GCGCCGAGGGGCTTCTCGTC
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase Group 1 Family Protein; Lipopolysaccharide Biosynthesys-Related Glycosyltransferase; First Mannosyl Transferase WbaZ; Group 1 Family Glycosyltransferase; Glycosyltransferase Family 4 Domain Protein; First Mannosyl Transferase O- Antigen Biosynthesis; Aldehyde Dehydrogenase; Glycosyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MAGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQSDLAALVDGESLRPGSWLEGRAIQTSPIQHLPWGV SHVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSPDQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQ LHVLRQWDQLSGARVNHLLANSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNQ LRLPLLVVGDGPEWAFLEELAGPTVQLLGRQTQAQVEALMESCRAFVYAALEDFGIAPVEAMAAGAPVIGLGRGGLLDTV RCAAAGRRYPTGVLFPEQTVASVAQAVAWFEERQLWQQLTPEVVRLCAEQFRPEAFASRFETALRQAWQQHQQACAVAAS DPVELLEFRS
Sequences:
>Translated_410_residues MAGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQSDLAALVDGESLRPGSWLEGRAIQTSPIQHLPWGV SHVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSPDQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQ LHVLRQWDQLSGARVNHLLANSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNQ LRLPLLVVGDGPEWAFLEELAGPTVQLLGRQTQAQVEALMESCRAFVYAALEDFGIAPVEAMAAGAPVIGLGRGGLLDTV RCAAAGRRYPTGVLFPEQTVASVAQAVAWFEERQLWQQLTPEVVRLCAEQFRPEAFASRFETALRQAWQQHQQACAVAAS DPVELLEFRS >Mature_409_residues AGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQSDLAALVDGESLRPGSWLEGRAIQTSPIQHLPWGVS HVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSPDQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQL HVLRQWDQLSGARVNHLLANSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNQL RLPLLVVGDGPEWAFLEELAGPTVQLLGRQTQAQVEALMESCRAFVYAALEDFGIAPVEAMAAGAPVIGLGRGGLLDTVR CAAAGRRYPTGVLFPEQTVASVAQAVAWFEERQLWQQLTPEVVRLCAEQFRPEAFASRFETALRQAWQQHQQACAVAASD PVELLEFRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45688; Mature: 45557
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQSDLAALVDGESLRPG CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC SWLEGRAIQTSPIQHLPWGVSHVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCCCCCCCC DQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQLHVLRQWDQLSGARVNHLLA CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH NSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNQ CCCHHHHHHHHHCCCCCCEECCCCHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHH LRLPLLVVGDGPEWAFLEELAGPTVQLLGRQTQAQVEALMESCRAFVYAALEDFGIAPVE CCCCEEEEECCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AMAAGAPVIGLGRGGLLDTVRCAAAGRRYPTGVLFPEQTVASVAQAVAWFEERQLWQQLT HHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PEVVRLCAEQFRPEAFASRFETALRQAWQQHQQACAVAASDPVELLEFRS HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure AGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQSDLAALVDGESLRPG CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC SWLEGRAIQTSPIQHLPWGVSHVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCCCCCCCC DQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQLHVLRQWDQLSGARVNHLLA CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH NSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNQ CCCHHHHHHHHHCCCCCCEECCCCHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHH LRLPLLVVGDGPEWAFLEELAGPTVQLLGRQTQAQVEALMESCRAFVYAALEDFGIAPVE CCCCEEEEECCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AMAAGAPVIGLGRGGLLDTVRCAAAGRRYPTGVLFPEQTVASVAQAVAWFEERQLWQQLT HHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PEVVRLCAEQFRPEAFASRFETALRQAWQQHQQACAVAASDPVELLEFRS HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA