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The map label for this gene is 33862570

Identifier: 33862570

GI number: 33862570

Start: 339767

End: 340351

Strand: Reverse

Name: 33862570

Synonym: PMT0297

Alternate gene names: NA

Gene position: 340351-339767 (Counterclockwise)

Preceding gene: 33862571

Following gene: 33862567

Centisome position: 14.12

GC content: 50.77

Gene sequence:

>585_bases
TTGCTTGGATCGGATATGGGCAAGGGATTTCTAGTTCTGCTTCTTGCTCTTTGGGCAGTCCCTTCCAATGCAGCAGAAGT
ACTTTCGATCGGTGATGGCGACACTCTCACCGTCATAGAAGGCAATCAAAGAACCAAAGTGCGACTTGCCTGCATTGATG
CTCCAGAGACTTCCCAATCGCCCTATGGCAAAGCAGCACGGCAAGCACTGAAGAGTCTTCTGCCGGTTGGTTCTGATGTG
ACTCTCCGCTCCAAGGCAACTGACCGCTATGGAAGAACCGTTGCTGAAGTCATTCTCAATGGCAGCAACATCAACCACTC
ATTAGTGAAGTCGGGGAATGCCTTTGTCTATTGGCAGTACATCAAAGGGTGTGATCGGCAGACCTACTCCCAACTAGAGA
CCTATGCCAGACGGGGAGGTATTGGGGTCTGGGTCTGTTCCTGGAGGAATACACCGACCTTGGGAATACAGGAAAAACAA
GCAGACCAACAGCAGGAGAAAGCGTTATCGGTGCAAAGAGATCAGATCATGGAATGCAGCACAGGAACTGCTCAGGGAAG
GGCACTCCTATCTGGATCGGGATAA

Upstream 100 bases:

>100_bases
TGCTGGTTGTTTTCTACGGGGTTTTGATGATGTGGTGGATCAGGGGATCTAAGAGAAAGCAAGACCTTGCCAAACCGTTG
ACGGAGAAGGAGTTTGCCAA

Downstream 100 bases:

>100_bases
AGACGGGGAGGCATGCGAGTCACTTAAATGAGGACTTCACTGACAGTGCTCCTCCACCAACAAGGCAGCATCTTCATTTC
CTAGTTCTGCTGCTTTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLGSDMGKGFLVLLLALWAVPSNAAEVLSIGDGDTLTVIEGNQRTKVRLACIDAPETSQSPYGKAARQALKSLLPVGSDV
TLRSKATDRYGRTVAEVILNGSNINHSLVKSGNAFVYWQYIKGCDRQTYSQLETYARRGGIGVWVCSWRNTPTLGIQEKQ
ADQQQEKALSVQRDQIMECSTGTAQGRALLSGSG

Sequences:

>Translated_194_residues
MLGSDMGKGFLVLLLALWAVPSNAAEVLSIGDGDTLTVIEGNQRTKVRLACIDAPETSQSPYGKAARQALKSLLPVGSDV
TLRSKATDRYGRTVAEVILNGSNINHSLVKSGNAFVYWQYIKGCDRQTYSQLETYARRGGIGVWVCSWRNTPTLGIQEKQ
ADQQQEKALSVQRDQIMECSTGTAQGRALLSGSG
>Mature_194_residues
MLGSDMGKGFLVLLLALWAVPSNAAEVLSIGDGDTLTVIEGNQRTKVRLACIDAPETSQSPYGKAARQALKSLLPVGSDV
TLRSKATDRYGRTVAEVILNGSNINHSLVKSGNAFVYWQYIKGCDRQTYSQLETYARRGGIGVWVCSWRNTPTLGIQEKQ
ADQQQEKALSVQRDQIMECSTGTAQGRALLSGSG

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 20968; Mature: 20968

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS01123 TNASE_1 ; PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGSDMGKGFLVLLLALWAVPSNAAEVLSIGDGDTLTVIEGNQRTKVRLACIDAPETSQS
CCCCCCCCHHHHHHHHHHCCCCCCHHEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCC
PYGKAARQALKSLLPVGSDVTLRSKATDRYGRTVAEVILNGSNINHSLVKSGNAFVYWQY
CCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEHH
IKGCDRQTYSQLETYARRGGIGVWVCSWRNTPTLGIQEKQADQQQEKALSVQRDQIMECS
HCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
TGTAQGRALLSGSG
CCCCCCEEEECCCC
>Mature Secondary Structure
MLGSDMGKGFLVLLLALWAVPSNAAEVLSIGDGDTLTVIEGNQRTKVRLACIDAPETSQS
CCCCCCCCHHHHHHHHHHCCCCCCHHEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCC
PYGKAARQALKSLLPVGSDVTLRSKATDRYGRTVAEVILNGSNINHSLVKSGNAFVYWQY
CCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEHH
IKGCDRQTYSQLETYARRGGIGVWVCSWRNTPTLGIQEKQADQQQEKALSVQRDQIMECS
HCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
TGTAQGRALLSGSG
CCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]